Plasmodium yoelii: PY17X_0524500
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Entry
PY17X_0524500 CDS
T01035
Name
(RefSeq) eukaryotic initiation factor 4A-III, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03013
Nucleocytoplasmic transport
pyo03015
mRNA surveillance pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_0524500
09122 Translation
03013 Nucleocytoplasmic transport
PY17X_0524500
03015 mRNA surveillance pathway
PY17X_0524500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyo03019
]
PY17X_0524500
03041 Spliceosome [BR:
pyo03041
]
PY17X_0524500
03009 Ribosome biogenesis [BR:
pyo03009
]
PY17X_0524500
03012 Translation factors [BR:
pyo03012
]
PY17X_0524500
Enzymes [BR:
pyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PY17X_0524500
Messenger RNA biogenesis [BR:
pyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PY17X_0524500
mRNA cycle factors
Stress granule specific factors
PY17X_0524500
Spliceosome [BR:
pyo03041
]
Complex C
Other components
EJC/TREX
PY17X_0524500
Ribosome biogenesis [BR:
pyo03009
]
Eukaryotic type
90S particles
Helicases
PY17X_0524500
Translation factors [BR:
pyo03012
]
Eukaryotic type
Initiation factors
eIF-4
PY17X_0524500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
BATS
AAA_19
AAA_30
Helicase_RecD
AAA_7
CMS1
PhoH
Motif
Other DBs
NCBI-GeneID:
3792444
NCBI-ProteinID:
XP_727104
UniProt:
A0A4V0KH13
Q7RAQ2
LinkDB
All DBs
Position
5:1051335..1052507
Genome browser
AA seq
390 aa
AA seq
DB search
MDKEETYKSSEKLEICTSFESIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQ
SQSGTGKTCVFAVGALNCVNRNISETQVIILSPTRELAEQTQKVCLALADYIHVTVYCCI
GGKKMSEDIKALNNGVHIISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQV
YDIYRFLSPNTQIVLSSATLPHEVLEITNKFMHNPVKILVKRDELTLEGIKQFFVSIEKE
QWKYETLADLYESLTITQAVVFCNTKLKVDWLAKKMQESNFTVCKMHAGMSQSERDDIML
KFRQCKYRVLISTDIWGRGLDVHEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFV
KNDDIKILRDIEQFYSTQIDEMPMNITELL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaagaaacttataaatcctctgaaaaattagaaatatgtacaagttttgaa
agtataggaatagatgaagggttattaagaggaatatatgcttatggttttgaaaagcca
tcagcaatacaacaaagaggtattaaaccaatattgaatggaagagatgttatattacaa
agtcaaagtggaacaggaaaaacatgtgtttttgctgttggtgctttaaattgtgttaat
agaaatataagcgaaactcaagtaataattttatcacccactagagaattagcagagcaa
acacaaaaagtttgtttagcattagcagattatatacatgtaactgtatattgttgtatt
ggtggtaaaaaaatgagtgaagatataaaagcattaaataatggtgttcatattattagt
ggaacgcctggaagaatatatcatatgttaaatttaagacatttaaaatgtaaatatata
aaacaattagttattgatgaagctgatgaaatgttaaataaagggtttaaagaacaagtt
tatgatatttatcgatttttatcacctaatactcaaatagttttatcatcagctacttta
ccacatgaagtattagaaataacaaataaatttatgcacaatcctgttaaaatattagta
aaaagagatgaattaactttggaaggaataaaacaattttttgtatcaatagaaaaagaa
caatggaaatatgaaactttagctgatttatatgaaagtttaactattactcaagcagta
gttttttgtaatactaaattaaaagtagattggctagctaaaaaaatgcaagaatctaat
ttcactgtgtgtaaaatgcatgcaggaatgagtcaaagtgaaagagatgatattatgtta
aaatttagacaatgtaaatatagagttttaatatcaacagatatatggggaagagggtta
gatgtacatgaagtttcgctagttgttaattatgatttaccaaattctagagaaagctat
attcacagaattggaagaagtggtagatttggaagaaaaggtgttgcaattaattttgta
aaaaatgatgatattaaaattttgagagatatagaacaattttattctacacaaatagac
gagatgccaatgaatattacagagttattataa
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