KEGG   Plasmodium yoelii: PY17X_0701700
Entry
PY17X_0701700     CDS       T01035                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8, putative
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
pyo  Plasmodium yoelii
Pathway
pyo03018  RNA degradation
pyo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PY17X_0701700
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PY17X_0701700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pyo03019]
    PY17X_0701700
   03041 Spliceosome [BR:pyo03041]
    PY17X_0701700
Messenger RNA biogenesis [BR:pyo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PY17X_0701700
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PY17X_0701700
Spliceosome [BR:pyo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PY17X_0701700
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 34859721
NCBI-ProteinID: XP_022811742
LinkDB
Position
7:complement(join(253760..253771,253903..253981,254103..254265,254376..254409))
AA seq 95 aa
MASINIESYIENEILVITKDSRIFTGKLKGFDQTTNIILGNCYERIYKDSLEKISLGIYI
IRGDNVTLIGEIDEEVDRNILQNKIKPEMLKPIIY
NT seq 288 nt   +upstreamnt  +downstreamnt
atggcttctataaatattgaatcatatatagaaaatgaaatattagtcattactaaagat
agtagaatatttacggggaaattaaaaggatttgatcaaacaacaaatataatactagga
aattgttatgaaagaatatacaaagattcgttggaaaaaataagcttaggaatatatatc
ataagaggagataatgtaacactaataggagaaatagacgaagaggtggatagaaatata
cttcaaaataaaattaaacccgaaatgctcaaaccaataatatactag

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