Plasmodium yoelii: PY17X_0709700
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Entry
PY17X_0709700 CDS
T01035
Name
(RefSeq) ATP-dependent RNA helicase DHX36, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PY17X_0709700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyo03019
]
PY17X_0709700
03012 Translation factors [BR:
pyo03012
]
PY17X_0709700
Enzymes [BR:
pyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PY17X_0709700
Messenger RNA biogenesis [BR:
pyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PY17X_0709700
Translation factors [BR:
pyo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PY17X_0709700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_11
AAA_22
HA2_N
nSTAND3
ResIII
AAA_14
ATPase_2
NPHP3_N
ABC_tran
TsaE
AAA_19
Flavi_DEAD
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
3789201
NCBI-ProteinID:
XP_022811780
UniProt:
A0A077Y6I9
LinkDB
All DBs
Position
7:join(530543..531778,531917..532210,532351..533226)
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AA seq
801 aa
AA seq
DB search
MKDLPILRYKNEIKEKLKNNNLIVIKGETGCGKTTQVPQIINELYFDKKEKDDIDEKNNQ
NDSQKILVSLPRRVATITVAERVSKEMGRGNVGEYVGYSIRFKNVCSKKTKIKFVTDGIL
IREIMGDPLLKNYKFIILDEIHERSIRTDVLLGYIKILLEKRKNLKIILMSATFDINIFN
NFLGNPPIISIPHKIHKISIFYPKNVIEDYLLSIVCTILQIHFENSYIKKNMNSSEYYEH
DDLKSADQELCDNTNISKNINNLNTQTSHFVNECHENYNNIIGDILVFLPGQEEIEMVNI
MLKEKLKIIYKGILLKKLINGKKGAKVNAAAADDANNAAADDADDADDIITKFNYAMGSL
DDNPIGDISFHFGDIEIIPDKIYTMKILQLYSSLPNKKQKMIFDPVPPNTRKVILSTNIA
ETSVTIPNIKYVIDSGKAKVKFFDEKKGCSVLKITKISKDSAIQRSGRAGREGPGKVYRI
YTKEEYENMKAFLIPEIFRSDLTQIYLELKAMNIKNPLNFNFPENPKKEFFIHSAKMLFK
IKAIDVNNNLTELGKQISMLPISPIYGNMLLSSVSFNCVDEMATLIALLNCDSIFLNFNF
YEETEQVNNNSLTKMASKDENDDEIKISDKNKIINISRKKLIHPDGDHLTIIHVFYLWEQ
EITNSGKKQFCNIYGLNNEVLINVQKIKKQLLEILSNKMGIKINKKLHMHKWDNIMMSLC
KSCYFNVAKNISNSSLFMNLVTKTKLRIHPSSTLFNSSNKPSFIFYSDIVQTKKLYARVV
TKVNPEWLIKYVPKSFQISKD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttaccaatattaagatataaaaatgaaataaaagaaaaattaaaaaataat
aaccttatagttataaaaggagaaacaggatgtggaaaaacaactcaagtaccacaaata
ataaatgaattatattttgacaaaaaagaaaaagatgatatagatgaaaaaaataatcaa
aatgattctcaaaaaattcttgtgtctttgccaagaagagttgctacaataacagtggca
gagcgtgtatcaaaagaaatgggaagaggaaatgttggtgaatatgtgggttatagtata
cgatttaaaaatgtttgttcaaaaaaaacaaaaataaaattcgtaacagatggaatatta
ataagagaaataatgggagatccattattaaaaaattataaatttattattttagatgaa
atacatgaaagatctataagaacagatgtattactaggatatattaaaatattattagaa
aaaagaaaaaatttaaaaattattcttatgtcagctacttttgatataaatatttttaat
aattttttaggaaatcctccaattatatctattcctcataaaattcataaaatttcaatt
ttttatccaaaaaatgtaatagaggattatttattgtctattgtatgtacaattttacaa
atacattttgaaaattcctatatcaaaaaaaatatgaacagttcagaatattatgaacat
gacgacctgaaaagtgcagatcaggagttatgtgataatacaaatatttctaaaaatata
aataatcttaacacacaaacttctcactttgtaaatgaatgtcatgaaaattataataat
ataatcggagacattttagtatttttgcctgggcaagaagaaatcgaaatggttaatata
atgcttaaggaaaagctaaaaattatttacaaaggaatattattaaaaaagttaataaat
ggcaaaaaaggtgcaaaagtgaatgctgctgctgctgacgatgctaacaatgctgctgct
gacgatgctgacgatgctgacgatatcataaccaaatttaactatgcaatggggtcgctt
gatgacaatcctattggtgatatatcgttccattttggtgatattgaaataattccagat
aaaatatataccatgaaaatattacagttatattcttccctacctaataaaaaacaaaaa
atgatttttgatcctgtccctcctaatacacgaaaggtaatcctcagcacgaacattgcc
gaaacgtcagtgacaattcctaacataaaatatgtaatagatagtggtaaagcaaaggta
aaattttttgatgaaaaaaaaggatgtagtgttttaaaaattacaaaaataagcaaagac
tctgcaattcaacgaagtgggagagcaggaagagaagggccaggaaaagtttatagaata
tacacaaaagaagaatatgaaaatatgaaagcttttttaatacctgaaatatttagatca
gatcttacacaaatatatttggaactaaaagcaatgaatataaaaaacccactaaacttt
aactttccagaaaaccccaaaaaagaattttttattcactcagcaaaaatgctatttaaa
ataaaagcaatagatgtaaataacaatttgacagaattaggaaaacagatatctatgctc
cctattagtcccatttatggaaatatgttgttatcatctgtttcttttaattgtgttgat
gagatggctacactaattgcacttttaaattgtgatagtatttttttaaattttaatttt
tatgaagaaactgaacaagtaaataataatagtttgacaaaaatggctagtaaagatgaa
aatgatgatgaaataaaaataagtgacaaaaataaaataattaatatttcgagaaaaaaa
ttaatacatccagatggagatcatctaacaataatacatgttttttatttatgggaacaa
gaaataacaaatagtggaaaaaaacaattttgtaatatttatggattaaataatgaagtt
ttaataaatgtacaaaaaattaagaaacaattattagaaatcttatcaaataaaatggga
ataaaaataaataaaaaattacatatgcataaatgggataatattatgatgtctttatgc
aaatcttgttattttaatgttgcaaaaaatatatcaaattcttctctttttatgaattta
gtaactaaaacaaaattacgaatacacccttcttctactctttttaattcctctaacaaa
ccttcatttattttttattctgatattgttcaaacaaaaaaattatatgcacgtgtcgtc
acaaaagtcaaccctgaatggctcatcaagtatgttcccaaaagttttcagatatctaaa
gattag
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