KEGG   Plasmodium yoelii: PY17X_0942400
Entry
PY17X_0942400     CDS       T01035                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4, putative
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pyo  Plasmodium yoelii
Pathway
pyo03018  RNA degradation
pyo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PY17X_0942400
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PY17X_0942400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pyo03019]
    PY17X_0942400
   03041 Spliceosome [BR:pyo03041]
    PY17X_0942400
Messenger RNA biogenesis [BR:pyo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PY17X_0942400
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PY17X_0942400
Spliceosome [BR:pyo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PY17X_0942400
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 3801141
NCBI-ProteinID: XP_022812277
LinkDB
Position
9:complement(join(1675986..1676125,1676213..1676423,1676588..1676629,1676916..1676921))
AA seq 132 aa
MVFPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISEC
YVRGSSVKYIRVQDQAIENAIEETAEQKSRNAGRGRGGVRGSGRNRGRGFGRGTDKRGGR
GGNIRAAGRGGY
NT seq 399 nt   +upstreamnt  +downstreamnt
atggtgtttcctttaactttgttaaaatgctctcaaaatcaaccagtgatggttgagcta
aagaatggagaaacttatagtggctttttagtattttgtgatcgatttatgaatttacat
atgaaaaatataatatgtacatcaaaagatggagataaattttggaaaatatctgagtgc
tatgttagaggaagtagtgtgaaatatattcgagtacaagaccaagctatagaaaacgcc
attgaggaaacggctgagcaaaaatcaagaaatgccggaagaggtcgaggtggtgtaaga
ggaagtggacgcaatagaggtcgaggatttggcaggggaacagacaaaagaggtggaaga
ggtggaaatataagagcagctgggcgaggaggatattaa

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