Plasmodium yoelii: PY17X_0943700
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Entry
PY17X_0943700 CDS
T01035
Name
(RefSeq) uncharacterized protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pyo
Plasmodium yoelii
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyo03016
]
PY17X_0943700
Enzymes [BR:
pyo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PY17X_0943700
Transfer RNA biogenesis [BR:
pyo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PY17X_0943700
Prokaryotic type
tRNA splicing ligases
PY17X_0943700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
3789303
NCBI-ProteinID:
XP_723978
UniProt:
Q7RI54
A0A077Y5C9
LinkDB
All DBs
Position
9:complement(1717508..1719031)
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AA seq
507 aa
AA seq
DB search
MMKHGKGEDVFKYIEKTNEKNLYRINKGLVPGMNVEGNMYVNEKLKLLIDEEIKMYQLNK
SSTFLPAVIQIANVSTLPGIVKASIALPDVHAGYGFSIGNVAAFDMNNEKAVISPGGVGF
DINCGVRLIRTNLFYNDIKDKQEELAQLLFNHIPVGVGSQGFILCNQNNLDDALSLGMDW
SVKEGYSWIEDKLNCEDNGRSLYANSDYVSVRAKKRGITQMGTLGAGNHYAEIQIVDEIY
DKKSAKLMGIEKKNQVCIMIHSGSRGLGHQIATDALIEMEKVMSKYKINVIDKQLACTPI
HSPEGQNYLKAMGAACNFAWINRSSMTFLARQAFSKVFNQSPDDLDMHVIYDVSHNIAKI
EEHFINGKVQNLLVHRKGSTRAFPPFHPLVPLDYQYCGQPILIGGTMGTYSYVLTGTEKA
MENTFGSTCHGAGRALSRNKSRNSLSYSDVLSNLKEKNISIRVASPKLIMEEAPESYKNV
SEVVQTCHDSGISNKAFRLRPVAVIKG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacatggaaaaggcgaggatgtattcaaatatattgaaaaaacaaatgagaag
aatctctatcgaataaacaaaggacttgttcctggtatgaatgtagaagggaacatgtat
gtaaatgagaaattaaaattattaatagatgaagaaataaaaatgtatcaattaaataaa
tcctctacatttctccctgctgtaatacaaatagctaatgtatcgactcttcccggaatt
gttaaagcttctattgcattacccgatgtacatgcgggttatggattttcaattggcaat
gttgcagcatttgatatgaataatgaaaaagctgttatatctccaggtggggtagggttt
gatataaattgcggagtaagattaattcgaacaaatttattttataatgatattaaagat
aaacaagaagaattggctcagctactttttaatcatataccagtaggtgttggatctcaa
ggatttattttatgtaatcaaaataatttagatgatgcattatctttaggtatggattgg
tcagttaaagaaggatattcatggatagaagataaactaaattgtgaagacaatggtaga
agcttatatgctaatagtgattatgtatctgttcgagctaaaaaaagaggaattacacaa
atgggcacattaggtgctggaaatcattatgcagaaatacaaatcgttgatgaaatttat
gataaaaaaagtgctaaattaatgggaattgaaaaaaaaaatcaagtatgtattatgatt
cattcaggtagtagaggattgggacatcaaattgctactgatgccttaatagaaatggaa
aaagttatgagcaaatataaaataaatgtaatagataaacaattagcttgcacacctatt
cattcacctgaaggacaaaattatctaaaagcaatgggagctgcttgtaattttgcatgg
attaacagatcttctatgacatttttagctagacaggcattttcaaaagtatttaatcaa
tcacctgatgatttagatatgcatgtaatatatgatgtttcacataatatagcaaaaatt
gaagaacattttattaatggtaaggtacaaaatctacttgtgcatagaaaaggatcaact
agagcattcccaccatttcatccattagtacctttagattatcaatattgtggtcagcca
atattaataggtggtacaatgggaacatattcatatgtattaacaggaactgaaaaagct
atggaaaacacatttggatccacatgtcatggggcaggacgagctttaagtagaaataaa
agtagaaattcattatcatattctgatgtattaagtaacttaaaggaaaaaaatatatca
atacgagttgcttcaccaaaattaattatggaagaggcaccagaatcttataaaaatgtt
tcagaggtagttcaaacatgtcatgattcaggaatatctaataaggcctttcgtctcaga
cccgttgcagtcataaagggatga
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