Plasmodium yoelii: PY17X_1008200
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Entry
PY17X_1008200 CDS
T01035
Name
(RefSeq) protein SOF1, putative
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pyo
Plasmodium yoelii
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pyo03009
]
PY17X_1008200
04121 Ubiquitin system [BR:
pyo04121
]
PY17X_1008200
Ribosome biogenesis [BR:
pyo03009
]
Eukaryotic type
90S particles
Other 90S particles
PY17X_1008200
Ubiquitin system [BR:
pyo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PY17X_1008200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
KNTC1_N
VASt
Motif
Other DBs
NCBI-GeneID:
3789670
NCBI-ProteinID:
XP_724349
UniProt:
A0A077YFB9
Q7RH93
LinkDB
All DBs
Position
10:444947..446362
Genome browser
AA seq
471 aa
AA seq
DB search
MKNQSQKPEVKIMHRNPEDYKNNTMRSNFMHVRNFDKNIHLFQREIEYKRALNATKMDKI
FAKPLVKCLDGHDDSIRSVCVSNKNLTDLYSGSCNGFINIWNIFDEKLMRKLKAHDGFVR
GLCISYDEKYLFSCGDDKYIKQWVIEKNKNINELNEDDTEQQNLHNLDYLENEIVPKKIY
VCKSVPNSIDKHFSEPLIISGSQTLDVWDYYRNNAIASFDYNSEYIYYVKFNYSQRNLVG
LTLSDNSIGLVDIKSKTPIQKLFLKYRSNSLSWNNMNPKQFIVANEDSNLYTFDIRYLKT
AYLVHKGFVNAVLDVDYSPIGNKFVACSYDKTIRLFNSDEAQSYDVYHTKRMQHVLCCKY
TLDSKYIITGSSDMCIRIWKSCSHEPSGVLSYKEKQAINYRNKLKEKYSSLKEIKRIRQH
HHVPALIKSMSDKKKIMLDAKKRKEKNRIQHSKNKDQLPIPEKKKIFVTEQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccaatcacaaaaaccagaagtaaaaattatgcatcgaaatcccgaggattac
aaaaataacacgatgcggtcaaattttatgcatgtgagaaattttgataaaaacatccat
ctttttcaaagagaaattgaatataaaagagctttaaatgcaacaaagatggacaaaatt
tttgctaagcctttggttaaatgtttagatgggcacgatgactctattagaagtgtttgt
gtttcaaataaaaatttaacagatttgtatagtggtagttgtaatggatttataaatata
tggaatatattcgatgaaaagttaatgagaaaattaaaagcgcatgatggatttgttaga
ggcttatgcattagctatgacgaaaaatatttatttagttgtggggatgataaatatata
aaacaatgggttatcgaaaaaaataaaaatataaatgaattaaatgaagatgatacagaa
caacaaaatttacataatttagattatttagaaaatgaaattgttcctaaaaaaatttat
gtatgcaaaagtgtacctaatagtattgataaacatttttctgaaccactaataatttca
ggtagccaaacattagatgtatgggattattatcgaaacaatgctatagctagctttgat
tacaatagcgaatatatatattatgtcaaatttaattattctcaaagaaatttagttggt
ttaacattatcagataattctataggattagtagatataaaaagcaaaacccctattcaa
aaactatttttaaaatatcgaagtaattcattaagttggaataatatgaacccaaaacaa
tttattgttgcaaatgaagattcaaatctctatacatttgatattaggtatttaaaaact
gcttaccttgttcataaaggttttgtaaatgcagttttagatgtagattactcaccaatt
ggaaataaatttgttgcatgctcttatgataaaactataagattatttaatagtgatgaa
gctcaaagttatgatgtatatcatactaaaagaatgcaacacgttctatgctgtaaatat
accttagattcgaaatatataataacaggaagctctgacatgtgcatacgaatatggaaa
tcttgttctcatgaaccttctggggtactttcatataaagaaaaacaagccataaattat
agaaataaattaaaagaaaaatattcatcattaaaagaaattaaaagaatcaggcaacat
catcatgtacctgctctaattaaaagtatgtccgataaaaaaaaaatcatgttggatgcc
aaaaaaagaaaagaaaaaaacagaatacaacactcaaaaaacaaagatcaattacccatc
cccgaaaaaaaaaaaatatttgtcacggagcagtag
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