Plasmodium yoelii: PY17X_1008600
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Entry
PY17X_1008600 CDS
T01035
Name
(RefSeq) replication protein A1, large subunit, putative
KO
K07466
replication factor A1
Organism
pyo
Plasmodium yoelii
Pathway
pyo03030
DNA replication
pyo03420
Nucleotide excision repair
pyo03430
Mismatch repair
pyo03440
Homologous recombination
pyo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PY17X_1008600
03420 Nucleotide excision repair
PY17X_1008600
03430 Mismatch repair
PY17X_1008600
03440 Homologous recombination
PY17X_1008600
03460 Fanconi anemia pathway
PY17X_1008600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pyo03000
]
PY17X_1008600
03032 DNA replication proteins [BR:
pyo03032
]
PY17X_1008600
03400 DNA repair and recombination proteins [BR:
pyo03400
]
PY17X_1008600
Transcription factors [BR:
pyo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PY17X_1008600
DNA replication proteins [BR:
pyo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PY17X_1008600
DNA repair and recombination proteins [BR:
pyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PY17X_1008600
MMR (mismatch excision repair)
PY17X_1008600
DSBR (double strand breaks repair)
HR (homologous recombination)
PY17X_1008600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
3789664
NCBI-ProteinID:
XP_724343
UniProt:
A0A077YH15
Q7RH99
LinkDB
All DBs
Position
10:complement(456797..460303)
Genome browser
AA seq
1168 aa
AA seq
DB search
MNKNEDILSKATPNFIYKFFTEPNSTEALRWINSEVNLICFSQMNAGGNQVFLKVIDGSI
PPQYYAIVHLGAEDNGNMDPPISYVKKIIKIQKFSITNYYGKLFILAKKVTIYLNIENFD
IEDLFKKYHLQSISYLLLNAQNDYNGSNDQRHPTSNRTRDDSSYTGEGYNNNNNDSNDNY
PKYNNNPPTNYNQRNNHNVDNPRGCTTPYKHDDMYRGNNNKECNNNWQSSKNYNKTDDEN
YEMNYRNPNMRIANDPSTKNNMSDSYNEPYNNKENMNFREDPSRYGPNGRNGYNNPLNNN
ENNNYYNRGDDSENNMGLNNRSRAPYNEYQNYKNNINSKNDGRLIMQDKNINACKMNSEY
TNNRNYTTNYDHNRTFENDQYNNSNKSKTHNININPNAHKSGKYDVHAYKMRDDGDHGDP
GYYSSDNNRNSNNNSYHKNLDQGYLKSKSSGSLPLEAELSERTVPHEYKYGSNNGRYSER
REGNVMDNYGRNKCEIMPGENKQRDFQGNDNYYIERDNNDGFPKSANNRLNGSIKENAMY
RERSVDNYNSHSDNNINMGNGIYGTEKENIHIAKKGNCDSDEMIEERKRPVMAREINNNG
NVRNPDLEIDRVRCNTYEKAENSNFNQRGDKKGNYVQNGEDCSNSINGSMIYMNETNETL
SNFDDVNEKKKVNETKLLKENNINRNNRKCNPYPNSAVIKINDGILMPINKLSQYSTKWI
IKARVQSKDNIRKFYTGNKEGKVFNIELCDESGEIKVNFFGKAVDKWYDYLEVGKIYKIS
KGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFYSISEIKANMNTGTL
VDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWGENAVKMEEMNITEN
CIICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLKNWWVNNKKNVYNTINLTTTTS
NNNMLNLESQKTIQEIKKNVNLANEEVLSGKGIIFTTFGFIDHIYNAIPVYSACPNCNKK
MVATVIEDGEQDMDQNVSESMYCAKCNKNNIPVYNYSINLKITDNTDSLRVSAFANSAKT
IMNGLSAEEFMKLRQEYISQENIENFDLIEKAKLNEFFFRIKAYMTSHMDEIKKNYTILE
TIPLSKLLVDNCRYLIKEIKLATEDIQE
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgaagatattttatcgaaggccacaccaaattttatatacaagtttttt
acagaacctaattcaactgaagcattgagatggataaactctgaagtgaatttaatatgt
tttagtcaaatgaatgcaggggggaatcaggtatttttaaaagtaattgatggaagcatt
cccccacaatattatgctattgtccatttaggtgcagaagataatggaaatatggaccct
ccaatatcttatgtaaaaaaaataattaaaatacagaaattttctataacaaattactat
gggaaactttttattttagcgaaaaaagttactatttatttaaatattgaaaattttgat
atagaagatttatttaaaaaatatcacttacaaagtatatcttatttgcttttaaatgca
caaaatgattataacggttctaatgatcagcgacatccaactagcaatagaactagagac
gacagtagttatacaggcgaaggatataataacaataataatgacagtaatgacaactat
cctaaatataataataacccgcctactaattataaccaaagaaacaatcacaatgtggat
aatccaagaggatgtaccacaccctataaacacgatgatatgtatagggggaataataac
aaagaatgtaataataattggcaaagttcaaaaaattataataaaacagatgatgaaaac
tatgaaatgaattatcgcaatcctaatatgaggatagcaaatgatccatctactaaaaat
aacatgtcagatagctataatgaaccttataataacaaagaaaatatgaactttagagaa
gatccttcacgatatggtcctaatggccgaaatggttacaataatccccttaataataat
gaaaataacaattattataatagaggtgatgatagtgaaaacaatatgggactaaataat
agatcgagagcaccctataatgaataccaaaattataaaaataatataaatagtaaaaat
gatgggagattaataatgcaagacaaaaatataaatgcatgtaaaatgaattcagaatat
accaataacagaaattatacaactaattatgaccataatcgtacatttgaaaatgatcaa
tacaataatagtaataaaagcaaaactcataacatcaatataaatccaaatgcacataaa
agtggaaaatatgatgtgcatgcttacaaaatgagagatgatggtgatcatggagatcct
gggtattacagtagcgataataatagaaatagtaacaacaatagctatcataaaaattta
gatcaaggttatttaaaatccaaatcatcaggatcattgccacttgaggctgaactgagc
gaaagaactgtgccccatgaatataaatatggatcaaacaacggaagatatagtgaaaga
cgagaaggaaatgtaatggataattacggacgaaataaatgtgaaataatgcctggagaa
aataagcaacgtgattttcagggaaatgataattattacattgaaagggataataatgat
ggttttccaaaaagtgccaataatagattaaatggaagtataaaagaaaatgcaatgtat
agagaaagaagtgtcgataattataattctcatagcgataataatataaatatggggaat
ggtatatatggaaccgaaaaagaaaatattcacattgctaaaaaggggaattgtgacagt
gatgaaatgatagaagaaaggaaaagacctgttatggcaagagaaataaataataatgga
aatgttcgtaatcctgatttagaaattgatagagttcgatgtaatacttatgaaaaagca
gaaaattctaactttaatcaacggggtgataaaaaaggtaattatgtacaaaatggagaa
gattgttctaatagtataaatggaagtatgatttatatgaacgagacaaacgaaacgcta
agcaactttgatgatgtaaatgagaaaaaaaaagttaatgaaacaaaattattaaaagaa
aacaatataaatagaaataacagaaaatgtaatccttatccaaatagtgcagttataaaa
ataaatgatggtatattaatgccaataaataagctgtcacaatactctacaaaatggata
atcaaagctagagttcaatcaaaagataatataagaaaattttatactgggaataaagaa
gggaaagtatttaacatcgaattatgtgacgaatctggggaaataaaggtaaattttttt
gggaaagctgtagacaaatggtatgattatttagaagttggtaaaatatataaaataagt
aaaggaaatataaaaagcgctaataaaaaatttaatacattaaaacatgattgtgaaata
actttagatgaaaattcaattttagaattattagaagaaaatgatatgaatataccaaaa
tatatttataatttttattcaattagtgaaataaaagctaatatgaatacaggaacttta
gtagatgtaatagggatagtattaagttttcaagaactaaatcaaatccttatcaaaaaa
actggacaatacaaagaaaaaaaggatttgatgctaattgacgaaacaaatgaaactatt
aatgtaacactttggggtgaaaacgctgtaaaaatggaagaaatgaatataactgaaaat
tgtattatatgttttaaatgcttaaaagtaggtgaatggcaagggaaaaaattagaatcg
catcccaaaacgaaagtagaaataaatccagaattagataaagcatatactttaaaaaat
tggtgggtaaataataaaaaaaatgtgtataatacaataaatttgactactactacttcg
aataataatatgttaaatttagagtcacagaaaacgatacaagaaattaaaaagaatgtt
aatttagcaaatgaagaagtactatccggaaaaggaataatttttacaacttttggattt
atagatcacatatacaatgcgatacctgtatattcggcttgtcctaattgtaacaaaaaa
atggtagcaacggttatagaagatggtgaacaagatatggaccaaaatgtttcagaatct
atgtattgtgctaaatgtaataaaaataatataccagtatataattattctattaattta
aaaattactgataatacagattctttaagagtatctgcttttgctaattctgctaaaact
attatgaatggactatcagctgaagaatttatgaagttaagacaagaatatatttctcaa
gaaaatattgaaaactttgatcttatagaaaaagcaaagctcaacgaattctttttcagg
atcaaagcatatatgacttctcacatggatgagataaaaaaaaattacactattcttgag
actatacccctaagtaaacttttggttgataactgtcgctacttgatcaaggaaatcaaa
ctagccacagaagatatccaagaataa
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