Plasmodium yoelii: PY17X_1141600
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Entry
PY17X_1141600 CDS
T01035
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_1141600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pyo03041
]
PY17X_1141600
Enzymes [BR:
pyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PY17X_1141600
Spliceosome [BR:
pyo03041
]
Complex C
Other components
Step II factors
PY17X_1141600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
ATPase
PhoH
T2SSE
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
3853714
NCBI-ProteinID:
XP_727269
UniProt:
A0A077Y6S8
Q7RR97
LinkDB
All DBs
Position
11:complement(1705976..1709428)
Genome browser
AA seq
1150 aa
AA seq
DB search
MIANNNFYGESSSEEEKIVETKIKEPKNDNLTFKKRNIKNISKKGNNDNSGKNIFKDIEF
ESKQKITFIKKRNFQNINNERKDTPKKINNKNNGQNVSKKYDTKEIENSDKSDFSNNSFE
YNKNNNQSDSDYDLKHKNRKGSSNDSDTSKNSNIRNDYEDNNRLNMKKTIYTKKNKDIRK
KVEKEYYTNNNDRILDEIWYTKEDDFIDSFYNVDVENTYYKEKKMQNNSKSILNSQREKV
NQKNVDNNLWELSKLKQGGVNSTYNKLQLEQINEANNTNEVKKIVLIRQVTPFFIDKMKN
SNTKNNTDMHKNDSNIKEIDNFNSYPFDKKNNSTSYFNVVKDETCDFVKSAKKGSEFLKY
FKNESEKSKGRDRYWEIERSKLGELLKIHRNKNSKETNSSTDQYNMNMRLDKVDAEDEEN
RHKEDVFDYKKDKMYSVNFDIKNNKKNTLKDKEDLLKLKESLPIYKSKKELLDAVYNNNI
IIIVGETGSGKTTQIVQYLYEEGYHKNGIICCTQPRRVAAVSVAYRVSYEMNVEIGSLVG
YTIRFEDNTSKQTKIRYVTDGILLRETLNDQDLDKYSVIIMDEAHERSINTDVLLGILKN
ICLKRNDLKLIVTSATIDSKKFSEFFGNAPIYNIQGRTFKVHLEYLRTPCNDYIECAVQK
AIEIHFSDNSYDKNFGDILIFMTGQDDINATCYLLSERFYEVYESYKESNSNKKETISKI
KNIINNKKDNNVNDEKDTSNNNGKLDLEMSKTNKDQVTRDQIDISSHISPFYIFPIYSQL
SSEQQSKIFQKYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQKIGMDVLQITP
ISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYPNNIPEIQRSNLSNVVLLLKSLNVE
NIFEFDFIDAPSKESIINSLHELWVLGAINNEGNLTETGQKMILFPLDPPLSKIIIYSEK
FACTKEILIIVSMLSSPSIFIETKENTETVESKKEKFAVPESDHLTLLNIYLQWKVHDYS
YTWCNKNFIQYKSLNKAKEVYSQLSDIIKSLRIKNISCNNKWDLVRKTICSGYFHNAAKL
KSFSEYINLTTNVACHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCEL
GPLFFYMKNA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaacaataatttctatggcgaatcttcgtccgaagaagaaaaaattgttgag
acgaaaatcaaagagcctaaaaatgataacttaacttttaaaaagaggaacattaaaaat
ataagtaaaaagggtaataatgataatagtggaaaaaatatatttaaagatatcgaattt
gaaagcaaacaaaaaattacatttataaaaaaaagaaacttccagaatataaacaatgaa
agaaaagatactcctaaaaaaattaacaataaaaataatggtcaaaatgtgagtaaaaaa
tatgacacgaaagaaatagaaaattcggataaaagtgattttagcaataattcatttgaa
tataacaaaaataataatcaaagtgattccgattatgatttaaaacataaaaatagaaaa
ggatctagcaatgatagtgatacttcgaaaaatagcaacataagaaatgattatgaggat
aataatagattaaatatgaaaaaaactatatatacaaaaaaaaataaggatataagaaaa
aaagtagaaaaagaatactatactaataataatgatagaattttagatgaaatttggtat
actaaagaagatgattttattgattcgttttacaacgttgatgtagaaaatacatattat
aaagagaaaaaaatgcaaaataattctaaaagtatattaaatagtcaaagggaaaaagtc
aatcaaaaaaatgtagataataatttatgggaattaagcaaattaaaacaaggaggtgtt
aattcaacatataacaagttgcaactagaacaaatcaatgaagctaataatactaacgaa
gttaaaaaaattgttttaattaggcaagtaacaccattttttattgataaaatgaaaaat
tcaaatacgaaaaataatacagatatgcacaaaaatgattcaaacataaaagaaatagat
aattttaatagttatccatttgataagaaaaataactccacgtcttactttaatgttgtt
aaagatgaaacatgtgattttgtaaaatcagcaaaaaaaggtagcgaatttttaaaatat
tttaaaaatgaaagtgagaaatcaaaaggacgagatagatattgggaaatcgaaagaagc
aaattaggagaactattaaaaattcatagaaataaaaatagcaaagaaactaattcaagt
acagatcaatataatatgaacatgagactagataaagtcgatgcagaagacgaagaaaat
agacacaaagaagatgtgtttgattataaaaaagataaaatgtatagtgttaattttgac
ataaaaaataataaaaaaaatacattaaaagataaagaagatttattaaaattgaaagaa
tcattacctatttataaatcaaaaaaagaattattagatgcagtatataataacaatatt
ataataattgttggagaaacaggttcaggaaaaacaacacaaattgttcaatatctatat
gaagaaggatatcataaaaatggaattatttgttgtacacaaccaagaagagttgcagct
gtttcagttgcttatcgtgtgtcatatgaaatgaatgtagaaataggatctttagttggg
tatacaattcgatttgaagataatacaagtaaacaaacaaaaataagatatgttacagat
ggtatattattaagagaaactttaaatgatcaagatttagataaatatagtgttattatt
atggatgaggcacatgaaagatctatcaatacagatgttttgttaggtatattaaaaaat
atatgtttaaaaagaaacgatttaaaattaatagttacatctgcaactatagattctaaa
aaattttcagaattttttggaaatgctccaatttacaatattcaaggaagaacgttcaaa
gtacatttagaatatttaagaactccatgtaatgattatattgaatgtgctgttcaaaaa
gcaattgagatacatttttctgataatagttatgataaaaattttggagatattttaatt
tttatgacgggtcaagatgatattaatgctacatgttatctattaagtgaacgattttat
gaggtatatgaatcatacaaagaatcaaatagtaataaaaaagaaacaataagtaaaata
aaaaatataattaataataaaaaggataacaatgttaatgacgaaaaagatacaagtaat
aacaatggaaaattagatttggaaatgtctaaaacaaataaagatcaagttacacgtgat
caaattgatatatctagccatatatctccattttatattttcccaatatattcacaatta
tctagtgaacaacaaagtaaaatatttcaaaaatatgatctcagaaaaataatagtttca
actaatatagctgaaacatctctaacattagatggaatcaaatatgtaattgatacagga
tattgtaaacttaaagtatataatcaaaaaattggaatggatgttttacaaataactcct
atttctcaagcaaatgctaatcagcgatcaggaagagcaggaagaacaggagctggaata
tgttatcgtctatatacagaaaatacatttttatgtgatctatatccaaataatattcca
gaaatacaaagaagtaatctatcaaatgtagtattattattaaaatcattaaacgttgaa
aatatatttgaatttgattttattgatgcaccaagtaaagaaagtattataaattcttta
catgaattatgggtattaggtgctataaataatgaaggaaatttaaccgaaacggggcaa
aaaatgatactttttcctttagaccctcctttatcaaaaattattatatatagtgaaaaa
tttgcatgtactaaagaaatattaattatagttagtatgctttcttcaccgtctattttt
atagaaacaaaagaaaatactgaaactgttgagtcaaaaaaagaaaaatttgcagtacca
gaaagtgatcatttaacattattaaatatttatttacaatggaaggttcatgattattct
tatacttggtgcaataaaaattttattcaatacaaatccttaaataaagcaaaagaagta
tattctcaattaagtgatattattaaatctttacgtattaaaaatatatcatgtaataat
aaatgggacttagtaagaaaaactatttgttctggatattttcataatgctgctaaatta
aaatcattttcagaatatataaatttaacaactaatgtagcttgccatgttcatccaaat
tcttctttatataatattggatatacacctgactatgtcatctatcaggaaattgttttt
accacaaaagaatacatgcgaaatgtcactacagtggatcctgagtggctttgtgaatta
ggtcccctctttttttacatgaaaaatgcgtga
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