Plasmodium yoelii: PY17X_1206900 Help Entry PY17X_1206900     CDS       T01035                                  Name (RefSeq) nonsense mRNA reducing factor 1   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism pyo  Plasmodium yoelii Pathway pyo03013   Nucleocytoplasmic transport pyo03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pyo00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     PY17X_1206900    03015 mRNA surveillance pathway     PY17X_1206900  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pyo03019]     PY17X_1206900 Enzymes [BR:pyo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PY17X_1206900     5.6.2.5  RNA 5'-3' helicase      PY17X_1206900 Messenger RNA biogenesis [BR:pyo03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      PY17X_1206900    mRNA cycle factors     Common to processing body (P body) and stress granule      PY17X_1206900 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 UPF1_Zn_bind AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD NPHP3_N PIF1 PhoH SRP54 AAA_16 nSTAND3 AAA_22 AAA AAA_25 Motif Other DBs NCBI-GeneID:  3801565 NCBI-ProteinID:  XP_729015 UniProt:  A0A078KD49 Q7RQ16 LinkDB All DBs Position 12:complement(351814..355707) Genome browser AA seq 1297 aa AA seqDB search MNKAQNCNQIDVDNFCDLYNIVDRKNNKKKNNEICNFNDLFKYDDYINEMKHNDRRSSCE EIQNTEYINKKNSKKNNNSSNYLCELSEKKRSNFDIDENRIQKLVSFSEACSDVESYAMS WNESHLRGYSESSVDCMNKEENGKDRISFKNEKHYFDSENEQVQNKCEDILSDEYIRDNK IKKKLNKKKGKIRDKNCYSSKNVKEYGEKYNKRNNKNITSIYKGSNNDSENEELKYYRCR YCEIDYVDSVVQCNTCERWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKNSVLGETILECY NCGCRNVFLLGFLPTLEEGVVIILCRDPCLAYYISINDKNGKNGKNDKNCKNEKNEKNCK NDKNCKNDKNMKRDIPIQDEESEGESKIKECNLENWQPVIEDRCFLEWLVNIPRKDDAEK KGKLTTSVNVNKLEEFWKNKKDVYINELDLKILDDEPKKVKLKYTDAIDYKLTFSPLIEL ESNYDKSIKEGHKQTNVTIRWDVGLNKKRYAYFVYIKEESELRIVVGDELKISYTYPNGN IWGCEGHISRLNSNEEIALELKVLYNIDGPWNYNINTGFVVEFVWKSTAYDRMQLALNEF AFNSFSLSGYLYHKLLGHDIIDEPIDYNKKEFNLNNDNKKYNKKLNDNLYTSYKIVNYSA PNLAPLNHSQIDAIKKSLNSPLSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVTAPSN VAVDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKLLKTDVGEELNKLLELKE EVGELSQKDENRLKKLILHAEYKILTEADVICTTCVGAMDKRLKRFRFNQVLIDEATQST EPECLVPIVTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERLVMLGITPFRLEVQY RMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFFYNSNGLEEMSASGT SYLNRNEAQNMEVLVRALLNAGLKATQIGVITPYEGQRAYITSLFQKNISYQHCLDIEVA SVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRQHF ISKEKINSNETITNVNSVWVNLLNQFKKKNLIVEGCLSNLKPITINIPTPVKQPSKYINF NYFQDLKNISSKIYDKGINRYTRDNGNNKDNHKFKYQRNDSILSQNMSNSSICNESVIDQ DIYNFINERKRKNKYSLNSYISNLSQLSQSNGSISDDIPNFKGINNSENIADGDVNYMSW NFNETNLDNKISSKNGDIFPYLFYQNNDANPQNKNLH NT seq 3894 nt NT seq  +upstreamnt  +downstreamnt atgaataaagcacagaattgtaaccaaatagatgtagacaatttttgtgatctatataat atagtggatagaaaaaataataagaagaaaaataatgaaatatgtaattttaatgattta tttaaatatgatgattatataaatgaaatgaaacataatgatagaagatctagttgtgaa gaaatacaaaacacagaatatataaataaaaaaaattcaaaaaaaaataataattcaagt aattatttgtgtgaattatctgagaaaaagaggtccaattttgatatagatgaaaataga atccagaaattggtatcattttcagaagcatgctcagatgtagaatcatatgccatgtca tggaatgaatcacatctaagaggttatagtgaatccagtgtggattgtatgaataaagaa gaaaatggtaaagaccgaatcagtttcaagaatgaaaaacattattttgattctgaaaat gaacaagtacaaaataaatgtgaagatattttgagtgatgaatatattcgagataataaa ataaaaaaaaaattaaataaaaaaaaaggaaaaataagagataaaaattgttattcctca aaaaatgtaaaagaatatggagaaaaatataataaaagaaataataaaaatataacaagc atctataaaggtagtaataatgattctgaaaatgaggaattaaaatattatagatgtaga tattgtgaaatagattatgttgatagtgttgtacaatgtaatacatgtgaaagatggttt tgtaatgggtcctatggaacatgtggaagtcatattgttacacatctagttcgatcaaaa cataaagaaataaagttacataaaaatagtgtccttggggaaacgatattagaatgttat aactgtggatgtagaaatgtttttttattaggatttttaccaacattagaagaaggggta gttattattttatgtcgggatccatgcttggcatattatatttctataaatgataaaaat ggaaaaaatggaaaaaatgataaaaattgcaaaaatgaaaaaaatgaaaaaaattgcaaa aatgataaaaactgcaaaaatgataaaaacatgaagagagatatacctattcaagatgaa gagagtgaaggagaatccaaaataaaagaatgtaatttagaaaattggcaaccagttata gaagatagatgttttttagaatggcttgtaaatattccacgaaaagatgatgcagaaaaa aaaggtaaattaacaacatctgtaaatgtaaataagttagaagaattttggaaaaataaa aaagatgtatatataaatgagttagatttaaaaatattagatgatgaacccaaaaaagta aaattaaaatatacagatgcaatagattataaattaacattttctccattaattgaatta gaatcaaattatgataaatcaataaaagagggacataaacaaactaatgttacaatacga tgggatgtaggtttaaataaaaaaagatatgcatattttgtatatattaaagaagaaagt gaattaagaatagtagtaggagatgaattaaaaatatcatatacatatccaaatggtaat atatggggttgtgaaggtcatatatctagattaaatagtaatgaagaaatagcattagaa ttaaaagtattatataatatagatggaccatggaattataatataaatacagggtttgtt gtagaatttgtttggaaaagtactgcttatgatcgtatgcaattagctttaaatgaattt gcttttaactcattttcattaagtggctatttatatcacaaattgttaggacatgatata attgatgaaccaatagattataataaaaaagagtttaatttaaataatgataataagaaa tataataaaaaattaaatgataatttatatacttcttataaaattgtaaattattctgct cctaatttagctccattaaatcattcacaaatagatgcaattaaaaaaagcttaaattct ccactctctttaattcaaggtccaccaggaactggtaaaacattaacatgtgcaacatta gtgtatcatatgcataaaacaaaaatgggaggaaaggttttagttactgcaccaagtaat gtagctgttgatcaattatctgttcgtattcatagaaccggattaaaagttgtaagatta tgtgcaagaagtagagaatctgtatctagtatagctgattatttatatttacataatcaa gttaaattacttaaaacagatgtaggagaagaattaaataaattattagaattaaaagaa gaagtaggtgaattatctcaaaaagatgaaaatagattaaaaaaattaattttacatgca gaatataaaattttaactgaagcagatgtaatatgtactacatgtgtaggtgcaatggat aaaagattaaaaagattccgttttaatcaagttttaattgatgaagcaactcaatcaact gaaccagaatgtttggttccaatagttactggagcaaaacaaatagtattggttggagat cattgtcaattaggacctataattgtatgtaaaaaagcagcaagttctgggttaggaaaa agtttatttgaacgtttggttatgttaggaatcacaccatttagattagaagtgcaatat agaatgcatccatgtttaagtgaatttccatcttatgtgttttatgatggatgtttacaa aatggtattacattaaaagaaagagaatatcctttaaaaaatttcccatggccaaattct aaatatccaatgtttttttataattctaatggacttgaagaaatgtctgcatctggaaca agttacttaaatagaaatgaagcacaaaatatggaagttttagttagagctttattaaat gcgggattaaaagctacacaaattggtgttataactccatatgaaggacaaagagcatat attacatcactttttcaaaaaaatatttcttatcaacattgtttagatatcgaagttgca tctgtagatgcatttcaaggaagagaaaaagattttattcttttatcatgtgtaagatca aataaaaaattaggaattggatttttaaatgatccaagaagattaaatgttgcattaaca cgagcaaaatatggattaataatttgtggtaatgcaaaagttttatctagacaacatttt atttctaaagaaaaaattaattctaatgaaactattacaaatgtaaattcagtttgggtt aatttattaaatcaatttaaaaaaaaaaatttaattgtagagggatgtttatctaactta aaaccaataacaattaacattccaacaccagttaagcaaccatcaaaatatattaatttt aattatttccaagatttaaaaaatataagtagtaaaatatatgataaaggaataaataga tatacaagagataatggaaataataaagataatcataaatttaaatatcaaagaaatgat tctattttgagtcaaaatatgtcaaatagtagtatttgtaatgagtcagttattgatcaa gatatttataattttattaatgaaagaaaaagaaaaaataaatattctcttaactcttat attagcaatcttagtcagctttctcaatccaatggtagtatatcagatgacattccaaac tttaagggaattaataattctgaaaatattgctgatggagatgttaattacatgagttgg aattttaatgaaactaaccttgataacaaaattagttcgaaaaatggagacatatttcca tatctattttatcaaaataatgatgccaatccacaaaataagaacctccactag

DBGET integrated database retrieval system