Plasmodium yoelii: PY17X_1220900
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Entry
PY17X_1220900 CDS
T01035
Name
(RefSeq) ATP-dependent RNA helicase DDX6, putative
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PY17X_1220900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyo03019
]
PY17X_1220900
03036 Chromosome and associated proteins [BR:
pyo03036
]
PY17X_1220900
Enzymes [BR:
pyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PY17X_1220900
Messenger RNA biogenesis [BR:
pyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PY17X_1220900
mRNA degradation factors
5'-3' decay
Decapping complex
PY17X_1220900
Chromosome and associated proteins [BR:
pyo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PY17X_1220900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Arcadin_1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
3807001
NCBI-ProteinID:
XP_022812627
UniProt:
A0A077Y7J3
LinkDB
All DBs
Position
12:complement(join(870518..871428,871634..872024))
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AA seq
433 aa
AA seq
DB search
MSYKTNCVASNANTNALNNSNNLNKIEDNVIFDEAWKKKILEPLKDPRYKTEDVTKTKGN
EFEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLE
KCNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKIQCMVTTGGTSLREDIMRLYNAVH
ILCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYS
ATFPVTVKEFRQIYLSDAHEINLMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQA
IIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRG
IDIQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITYEDRFNLYKIELELGTEI
QPIPNEIDPSIYT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaaactaattgtgtcgcttcaaatgctaataccaatgctttgaataattca
aataatttaaataaaatagaagacaatgtcatatttgatgaagcttggaaaaaaaaaata
ttggagccattaaaagatcctcgatataaaacagaagatgtgacaaaaaccaaaggaaat
gaatttgaggattactttttgaaaagagagcttttgatgggtatttttgaaaaaggttat
gaaaaaccatctccaatacaagaggaaagtattcctgtggctttggctggaaaaaatatt
ttagctcgagcaaaaaatgggacaggaaaaaccgccgcatttgctattccgttactagaa
aaatgcaatactcataaaaatttcattcaaggtttaatattagttcccacaagggaatta
gcactacaaacatctgctatgataaaagaattaggaaaacatatgaaaattcaatgtatg
gtaacaactggtggtacttcattaagagaagatattatgagactttataatgccgttcat
attttatgtggaacccctggaagaatcttagatttagcaaataaagatgttgcaaattta
tcaggatgtcatataatggtaatggatgaagcagataaattattgtcccctgaattccag
cctatagtagaagaattaatgaaatttttaccaaaagaaaaacagatattaatgtattca
gctacctttccagttactgttaaagaatttagacaaatttacttatcagatgctcatgaa
ataaatttaatggatgaattaacattaaaaggtattacccaatattatgcgtttgttaaa
gagaggcaaaaagtacattgtttaaatactttatttgctaaattacaaattaatcaagct
ataatattttgtaacagtataacaagagttgaactgttagcaaaaaaaattacagaatta
ggttatagctctttttatatacatgcaagaatgtcgcaaacacatcgaaatcgtgttttt
catgattttagaaatggtgcttgccgatgtttagtttcctcagatctttttacaagaggt
atcgacattcaatctgttaatgtagtaattaattttgattttcctaaaaattcagaaact
tatctacatagaattggtagatcaggaagatatggtcacttagggttagccattaattta
attacatatgaagaccgttttaatttatataaaatagaattagaactaggaactgaaatt
caaccgatccctaacgaaatagatccatccatctatacttaa
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