Plasmodium yoelii: PY17X_1233900
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Entry
PY17X_1233900 CDS
T01035
Name
(RefSeq) RNA and export factor binding protein, putative
KO
K12881
THO complex subunit 4
Organism
pyo
Plasmodium yoelii
Pathway
pyo03013
Nucleocytoplasmic transport
pyo03015
mRNA surveillance pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_1233900
09122 Translation
03013 Nucleocytoplasmic transport
PY17X_1233900
03015 mRNA surveillance pathway
PY17X_1233900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyo03019
]
PY17X_1233900
03041 Spliceosome [BR:
pyo03041
]
PY17X_1233900
Messenger RNA biogenesis [BR:
pyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PY17X_1233900
TREX complex
PY17X_1233900
Spliceosome [BR:
pyo03041
]
Complex C
Other components
EJC/TREX
PY17X_1233900
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PY17X_1233900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
DUF6331
Motif
Other DBs
NCBI-GeneID:
3791343
NCBI-ProteinID:
XP_022812688
UniProt:
A0A078KAN3
LinkDB
All DBs
Position
12:join(1390639..1390666,1390793..1390848,1391015..1391083,1391223..1391318,1391593..1391661,1391799..1391862,1392021..1392115)
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AA seq
158 aa
AA seq
DB search
MREFRRYHNDDRQHRKHNRSHVKYGRSNNNGYKTNNHYSRINKQNGKNKHRNHDHMRNDM
ERNSHARVKISNLEYTINKENLMELFTNVCKVVNVWINYDHTDRSDGTAVCIFESIEDAQ
KAIDKYDGSEIEGQSIKMEMLHKSNYGYKKKYKSKCPW
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatttcgaagatatcataatgacgaccgtcaacatagaaaacataatagatca
catgtcaaatatggccgttccaataataatggatataaaacgaataaccactacagtcga
ataaataaacaaaatgggaaaaataaacatagaaaccacgatcacatgaggaacgatatg
gaacgaaattcccatgcccgagttaaaatatccaacttggaatatacaattaacaaagag
aacttaatggaattgtttactaatgtatgcaaagttgtaaacgtatggataaactatgat
catacggatagatcggatggaacagcagtttgtatttttgaaagtatagaggatgctcaa
aaagcaattgataaatatgatggctccgagattgaagggcaatccattaaaatggaaatg
ctacacaaatcgaattatggttacaaaaaaaaatataaaagtaaatgcccttggtaa
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