Plasmodium yoelii: PY17X_1235500
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Entry
PY17X_1235500 CDS
T01035
Name
(RefSeq) splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pyo
Plasmodium yoelii
Pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_1235500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pyo03041
]
PY17X_1235500
Spliceosome [BR:
pyo03041
]
Common components
Common spliceosomal components
SR proteins
PY17X_1235500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
F07F6_N
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
3789952
NCBI-ProteinID:
XP_724630
UniProt:
Q7RGJ9
LinkDB
All DBs
Position
12:complement(join(1451043..1451636,1451844..1452179))
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AA seq
309 aa
AA seq
DB search
MVIRDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAA
DAIKEKDGCDFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSKSRRGRYVVEVSGLPLSG
SWQDLKDHLREAGECGHADVFKNGTGEVSFFHKEDMLEAIEKFNGSTFRSHEGEKAKITI
RQKKTSWRRDDGYGRYSDRNRSYSSRSYSRSDKRSYSRSRSYSSRSYSRSRSRSRSRSRS
RSRTSSSRSRSMDRRRDAYEKKRSYSRSSSYQDRRRNNRSISKSGSRSVSRSGSRSASRS
SSWSHKRRH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttatacgtgatagcgtttcaagaatatacgttggtaatctaccatcacatgtcaca
tctagagatgtagaaaatgaatttagaaaatttggtacaatattaaagtgtgatgttaaa
aaaacagtatcgggtgctgcatttgcatttatagaattcgaagatgcacgagatgcagca
gatgcaattaaagaaaaagatggatgtgattttggtggaaataaattacgagttgaagtc
ccatttaatgctagagacaatggaaaatataactcaagaggtagaggaatgatgggaagg
ggttcaaaatcaagaagaggacgatatgttgtggaggtttctggattacccctttcaggt
agttggcaagatttaaaagatcatcttagagaagcaggggaatgtggtcacgcagatgtt
tttaaaaatggtacaggtgaagtttccttttttcataaagaagatatgcttgaagctatt
gaaaaatttaacggatcaacatttagatcacatgaaggagaaaaggcaaaaataacaata
cgtcaaaaaaaaacatcatggcgacgagatgatggatatggtagatatagtgatagaaat
agaagttattcaagccgaagttattcaagaagtgataagagatcctattcaagaagcaga
agctacagtagcaggagctatagtagaagcagaagtcgaagcagaagtcgtagccgaagt
agaagcagaacatctagtagtagaagcagaagtatggatagaagaagagatgcatatgaa
aaaaaaagaagctactctagaagctcatcttatcaagatagaagaagaaataatagatcc
atatcaaaatcgggatctagatctgtttccagatcaggttcacgatctgcttcaagatct
tcatcatggtctcataaaagaagacattag
DBGET
integrated database retrieval system
