Plasmodium yoelii: PY17X_1451900
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Entry
PY17X_1451900 CDS
T01035
Name
(RefSeq) splicing factor 3B subunit 3, putative
KO
K12830
splicing factor 3B subunit 3
Organism
pyo
Plasmodium yoelii
Pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_1451900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyo03021
]
PY17X_1451900
03041 Spliceosome [BR:
pyo03041
]
PY17X_1451900
03036 Chromosome and associated proteins [BR:
pyo03036
]
PY17X_1451900
Transcription machinery [BR:
pyo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PY17X_1451900
Spliceosome [BR:
pyo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PY17X_1451900
Complex B
PY17X_1451900
Complex C
U2 SnRNP specific factors
PY17X_1451900
Chromosome and associated proteins [BR:
pyo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PY17X_1451900
TFTC complex
PY17X_1451900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
3431672
NCBI-ProteinID:
XP_022813013
UniProt:
A0A078KCD8
LinkDB
All DBs
Position
14:join(2052064..2055249,2055429..2055497,2055662..2055808,2055965..2056066,2056280..2056417)
Genome browser
AA seq
1213 aa
AA seq
DB search
MPILYHLTLQKPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVIVSKDVFG
IIRSLEIFRLLGSNKDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIIPGEY
IAIDPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVALNVGFENP
MFVSIEQNYENLDKQVLNANEQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDITAHLLIP
LPGGQQGPSGLIVCCENYLVYKKIDHDDIFCSYPRRLEVGEEKNISIVCWTIHRIKTFFF
ILIQSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQ
FSGIGNDSNDAMCTSNHPSGKNAIIAFKTQKLKNLYLVDQIYSLSPIVDMKILDAKNSNL
PQIYALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTVKKDNSSEYDGYIIVSFEG
NTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHINGKIVQEWIPPKN
KQINAATSNGSQIVVSLSGGELIYFEIDESHTLTEIFRKNINVEILCLSIQQIQQNKLRA
SFLAVGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMKELGNQKEHTILYLN
IGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYLCYVYQ
GKYIYSPLNYDVLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNILHLTFTPR
KIVPLPFPSLFYDNDTSLEIKRIKNIQMLAIIEADHNAYDENTQQEIQKALRDIKLEGKG
ETQDGGDEQENDEEELLYDRIGTPKAGLGKWGSCIKIINPINLQIIDKISLELEEAALSV
CACELEALHCLIVGTTTNMTLKNRNVPSASLRVYTYDINYKLNLLHITPIEDQPYCFCPF
NGRVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVSGDRIFASDIRESVLIFFYD
SNQNLIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFILREYGIANKCWYGGEVINSS
TKNRKMEHIMSFHIGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDSKEELELTQH
LEIILRTEKHSLCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPFEVQRKIGSDLEKTPDE
ILRKLEDIRNKIL
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgccaatattgtatcatctaactttacaaaagcctacagcaattaccagaacagtatat
ggaaatttctcgggaccaaaagcacatgagatagtagttgcaaaaggtcaagtattagaa
ttattaagagctgataaacaaggtaaattaaatgttatagtttctaaggatgtatttggt
ataatccgaagtttagaaatctttcgattattgggaagtaataaagattatatagcaatt
ggtagtgattcaggaagattagtaatattaaaatatgatgatgaaaaaaatgattttatt
agagtacattgtgaaacttatggtaaaagtggaataagacgaattataccaggtgaatat
attgctatagatcctaaaggaagagccttaatgttatgtgctattgaaaaacaaaaattt
gtatatatattaaatagagataataaagaaaatttgactattagtagtcctttagaagca
cataaatctcattctatatgtcatgctgtagttgcattaaatgttgggttcgagaatcca
atgtttgtttcgatagaacaaaattatgaaaatttagataaacaagttcttaatgcaaat
gaacaaataatggaatatccaaaaaaagggttatgtttttgggaaatggatcttggatta
aatcatgtaattaaaaaacatacaatacctattgatattactgcacatttattaataccc
ttaccaggaggtcaacaaggacctagtggattaattgtttgttgtgaaaattatttagta
tataaaaaaatcgatcatgatgatatattttgttcatatccaagacgattagaagttgga
gaagaaaaaaatatatccattgtttgttggacaatccatagaatcaaaacattttttttt
atcttaatacaatctgaatatggtgatctatataaaatagaagttaatcatgaagatggt
atagtaaaagaaataatttgtaaatattttgatacagttccaatagctaattctatatgt
gtattaaaatcaggagcattatttgtagcagcagaatttgggaatcattttttttatcaa
ttttctggtattggtaatgattctaatgatgctatgtgtacatctaaccatccatcagga
aaaaatgcaattatcgcatttaaaacacaaaaattaaaaaatttatatttagtagatcaa
atatattctttatccccaatagtagatatgaaaatattagatgcaaaaaattcaaatctt
ccacaaatatatgctttatgtggtagaggcccaagatcatcattacgaatattacagcat
ggattaagtattgaagagttagcaaataatgaacttccaggaaaacctagatatatatgg
acagttaaaaaagataattcaagtgaatatgatggatatattatagtaagttttgaagga
aatacacttatattagaaattggagaaacagtagaagaagtatatgatagtcttctttta
acgaatgtaactacaatacatattaatttattatatgataattcttttattcaagtatat
gatacaggaatacgacatatcaatggaaaaattgtacaagaatggataccaccaaaaaat
aaacaaattaatgcagccacttcaaacggttcacaaattgtagtatctcttagtggtggt
gaattaatttatttcgaaatcgatgaatcacatactttaactgaaatatttagaaaaaac
attaacgttgaaattttatgtttatctatacaacaaatacaacaaaataaattaagagct
agctttttagcagttggctgtcttgataatgtagtacgtttattatcaatagaaaaagat
caatattttaaacaattatctacatacatattaccaaataattcatcacctcaagatata
tgtatatctgaaatgaaagaattgggaaatcagaaagaacacactattttatatttaaat
ataggactaaatacaggtgtacttttacgaagtgtaatagatcctatatgtggaacatta
agtaatcattattctaaatatttaggtgcgaaatctgttaaaatttgtcatgtacaagtt
aataaaaatccagcacttttagtattatccgaaaaaacatatctatgttatgtatatcaa
gggaaatatatttattccccattaaattatgatgtattagaatatgcatcatctttttat
tctgaacaatgttcagatggatatgtagctatatctggaaacagtttaagaattttccga
ttttatagacttggtgaagtttttagtcaaaatattttacatttaacatttactccaaga
aaaattgtcccattaccattcccttcattattttatgataatgacacatctttagaaatt
aaaagaatcaaaaatatacaaatgttagctattatagaagcagaccataatgcatatgat
gaaaatacacaacaagaaatacaaaaagcattacgtgatattaagcttgaaggaaaagga
gaaacacaagatggaggagatgaacaagaaaatgatgaagaagaattattatatgaccgt
ataggaaccccaaaagctggtttaggcaaatggggatcctgtattaaaattattaaccca
ataaatttgcaaattatagataaaatatcattagaattagaagaagcagcattaagtgtt
tgtgcttgtgaacttgaagcattacattgtttaatagttggaaccactacgaatatgaca
ttaaaaaatagaaatgtaccatcagcatctttaagagtatatacatatgatataaattat
aaacttaatttgttacatattacacctatcgaagatcaaccatattgtttttgcccattt
aacgggagagttatagtatctgttggaaataaattaagaatatatgcattaggaaaaaaa
aaattattaaaaaaatgtgaatataaagatattccagaagcaattgtttcaataaaagtt
tctggagacagaatttttgcatctgacatcagggaatctgttcttatatttttttatgat
tctaatcaaaatcttatacgacttatatctgatgacattatacctcgatggataacatgt
tcagaaattttggatcatcatactattattgctgcggacaaatttgattctgttttcatt
ttgagggaatacggaatagctaacaaatgttggtatggtggagaagtaataaatagctca
acaaaaaatagaaagatggagcacatcatgagttttcatattggagaaattgtcacgtcc
ttacaaaaagttaaactatctcctacaagcagcgaatgtataatatattccaccataatg
ggaaccataggagcctttattccatatgatagcaaagaagaactggaactaactcaacat
ttagaaataattttaaggacagaaaaacattctctatgtggaagagagcacatatttttt
cgttcctattatcatccagttcagcatgttattgacggtgatttatgcgaacaattttcg
agcctaccatttgaagttcaaagaaaaattggatccgacttagaaaaaacaccagacgaa
attttaagaaaattagaagacataagaaataaaatactttaa
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