KEGG   Pyrobaculum ferrireducens: P186_0510
Entry
P186_0510         CDS       T01670                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pyr  Pyrobaculum ferrireducens
Brite
KEGG Orthology (KO) [BR:pyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyr03400]
    P186_0510
Enzymes [BR:pyr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     P186_0510
    5.6.2.6  RNA 3'-5' helicase
     P186_0510
DNA repair and recombination proteins [BR:pyr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    P186_0510
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII AAA_25 Cas3-like_C_2 HTH_28 AAA_19 DUF2332 Zn_ribbon_8
Other DBs
NCBI-ProteinID: AET31962
UniProt: G7VGX9
LinkDB
Position
439800..442586
AA seq 928 aa
MVFHLLHPAVREALRERGIEEPTEPQMKAIPEVLAGNNVLIIAPTGSGKTEAALLPILSM
MLTTGLENAGIYVLYITPLRALNRDLLERIRWWGERLGLRVDVRHGDTDKADRQRQSKTP
PHILITTPEMLQAIMTGRRLLSHLKELRWVIVDEVHELAEDKRGVQLSLALERLRYHVGR
DFQIVGLSATVGSPVEVAKFLIGADRPFKIVMVSVTRYMKLDVVRPRPKEEDVKLAEASS
LFPDVVARLRLIKRLVEENRSTLIFVNTRSMAELLGFRLSYLFPDLPAAVHHSSLSKMVR
VSVEERLRRGELKAVVATSSLELGIDIGHVDLVIQYISPHQVTRLLQRVGRSGHRLTAVP
KGVVIGEDVNDVMEAAVIVKMARSGFIEPTQIPNKPYDVLVNQVVAFLILKPRWKLEELY
GVIKKAYPYRDLALDELRRVVKFMQDLYPRLAVYFEDSDTVARPRGRGFYRYFYETLSMI
PDERQYAVINAQTGELVGALDESFVAEYGNVGVKFIFRGRPWLITAVEDRSIKVVEVSDP
SGAIPSWIGEEIPVPFEVAQEVGKLRRMARNGLDYGAIAEEYGINEETARFIVEEMEKHR
GPLPDERTVVVEQYRDNVVIVHAAFGTLVNRALGKLLGELLIKVLERPVGVHQDPYGVII
QSADKLPAELVVSQIRKLSSMDVRELAELIKSALVKSGSFKRRILHVAKRMGAVDKEADV
YNISMSKLVDAFSGTPVFDEALREALEKDLDLSHTVEILQRIKTGEISVVYTAAPTYLGD
VLYEKLSHRLEIIPPERLRRLVLDSAKARLLNYAMLAVCLECGWYGMVRVGEVNEVACPR
CGGNNIGVVRVVRSDNLEREVRRNYEEVKKTAEILRRHGWAGLYALASRLPIEAVESLLA
EADGADINSLTEKIQEMEKEYLKQRLLE
NT seq 2787 nt   +upstreamnt  +downstreamnt
gtggtttttcatctacttcaccccgccgtgagggaggcgttgagagagagggggatagag
gagccgaccgagcctcagatgaaggcgatacccgaggtgctggctggcaacaacgtcctc
ataatagcccccacgggcagtgggaaaaccgaggcggctctgttgcctatactttctatg
atgcttacgacgggtctggagaacgccgggatttatgtgctctacataactccgcttagg
gcgcttaatagagatctgctggagaggattaggtggtggggcgagaggcttgggctgagg
gtggacgtgaggcacggcgatactgacaaggctgataggcagaggcagagcaagacgccg
cctcacatattgataacgacgcccgagatgctccaagccatcatgactgggaggaggctg
ttgagccacttgaaggagttgcggtgggtcatagtcgacgaggttcacgagctggctgag
gacaagcggggggtccagctgagcctcgcgcttgagcggctgaggtaccacgtgggtagg
gacttccagatagtggggctctcggccaccgtaggtagccccgtggaggtggcgaagttc
ttaatcggggctgacaggccctttaagatcgtgatggtcagcgtcactaggtacatgaag
ctcgacgttgtgaggcctaggccaaaggaggaggacgtgaagctggcggaggcctccagc
ctgtttccagacgtcgtggctcggttgcggctgataaaaaggcttgtggaggagaaccgt
agcacgttgatttttgtcaatacgagaagcatggcggagctcctcgggttccggctctca
tacctcttccccgacctgccggccgcagttcaccactcctcgctgtcaaaaatggtgagg
gtttcggtggaggagaggttgaggaggggtgagttgaaggctgtggtggccacctccagc
ctagagctgggtatcgacatcgggcacgtggatttggtaattcagtacatctctccccac
caggtgacgcggcttctacagagggtgggaagaagcgggcacagactgaccgcggtgccg
aagggggttgtgataggggaagacgtcaacgacgtcatggaggcggctgtcatcgtcaaa
atggccaggagcggcttcatagagccgacgcagatacccaacaagccctacgacgtattg
gtgaaccaagtagtggcgtttttaatactaaagccgcggtggaagcttgaagagctctac
ggcgtcataaagaaggcgtatccatatagagacctcgcgctggacgagctgaggagggtg
gtgaaatttatgcaagacctctatccgaggctggctgtgtattttgaggacagcgacacc
gtggcgaggccgagggggcgcggcttctaccgctacttctacgagaccctgtctatgata
cctgacgagaggcagtacgcagttataaacgcccagacgggcgagctcgtcggcgccctc
gacgagtcgttcgtggctgagtacggcaacgtgggggtgaagttcatattcagaggcagg
ccctggcttattacagccgtcgaggataggagcatcaaggtggtggaggtctcagacccc
tccggcgccataccgagctggataggcgaggagatacctgtgccatttgaagtggcgcag
gaagttggaaagttgcggaggatggccaggaatgggcttgattatggggccatagcggag
gagtacggcataaacgaggagacggccaggtttattgtagaggagatggagaagcaccgg
gggcctctgcccgacgagaggacggtcgtggtggagcagtacagagacaacgtggttatt
gtacacgccgctttcggcacgctggtcaacagagcacttggcaaacttctgggcgagttg
ttgataaaagttctggagagacccgtcggcgtccaccaagacccctacggggtgataata
cagtccgcagacaagctcccggcggagctcgtcgtctcgcagattcgtaaactctcctca
atggatgtgagagagctcgctgagttgataaagtcggcgttggtgaaatccggctcgttt
aaacgcagaattctccacgtggctaagagaatgggggccgtggacaaggaggcagacgtc
tacaacatcagcatgtcgaagctggtcgacgcgtttagcggaacgcccgtttttgacgag
gctttgagagaggcgcttgagaaagacctagacctttcgcacactgtggagatcctccag
aggataaagacgggcgagatctcggtggtctacacagcggcgccgacatacctaggcgac
gtcctctacgagaagctgtcccataggctggagattataccgcccgagaggctgaggagg
ctggtgctagacagcgcaaaagccaggttgctaaactacgccatgttagccgtgtgtcta
gaatgcgggtggtacggcatggtgcgcgtcggcgaggtcaacgaagtggcatgccccaga
tgcggcggcaacaacataggagtcgtgcgcgtggtgcgtagcgacaacctggagagggag
gtccggcgcaactacgaagaggtgaagaagaccgccgagattctgcgcagacacggctgg
gctgggttgtacgcactagcctcgcgtctgcctatcgaggccgtggagagcctgctggcg
gaggccgacggagccgatatcaacagcttaaccgagaagatacaggagatggagaaggag
tatctaaaacagagacttcttgaatag

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