Pyrobaculum ferrireducens: P186_1542
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Entry
P186_1542 CDS
T01670
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pyr
Pyrobaculum ferrireducens
Pathway
pyr03022
Basal transcription factors
pyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
P186_1542
09124 Replication and repair
03420 Nucleotide excision repair
P186_1542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyr03021
]
P186_1542
03036 Chromosome and associated proteins [BR:
pyr03036
]
P186_1542
03400 DNA repair and recombination proteins [BR:
pyr03400
]
P186_1542
Enzymes [BR:
pyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
P186_1542
Transcription machinery [BR:
pyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
P186_1542
Chromosome and associated proteins [BR:
pyr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
P186_1542
DNA repair and recombination proteins [BR:
pyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
P186_1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
nSTAND3
AAA_25
Zot
Motif
Other DBs
NCBI-ProteinID:
AET32961
UniProt:
G7VFF5
LinkDB
All DBs
Position
complement(1303480..1305219)
Genome browser
AA seq
579 aa
AA seq
DB search
MDFFPYAEARQFQREIYEKVYDALRRGAAALINAPTGLGKTSAVLAAAVKYMLETGVRVH
YAVRTRAELEPPVRELAKIRQLGADFNYIVIKSKQDMCCYPQIRKLSYLEFLAECSLLKS
LGRCAYYPPGDVDVPLKNVATYVKLLCASKTCPYEYAKRKLDEAEVVISTYYYIFGREEA
QTKGKVVIIDEAHALFDAVVHLHSIKISEGELRQAYREARKYGYVEEAAKIYAIYTYVKK
AEGNVDLGDLAGLVADLQLDDAIREITKRKTESLLNPYTPLLLVKELRDAIKNRRRHHAQ
VEYVEGLRTLALYPLDPTSIVREKLRGAHSVVYISGTLPIGLFAEALALSNYEELDVPFN
KYIPRENYLSIVDVGVTTKYAERGEEMYLKIAKRLAACINASPRGVLAVFPSYEVMKGVK
KYLKISIPHWYEDGGEVSLADIPEKFFIGAVARGRYTEGVEYTRDGANLLSTVVIVGVPY
PEPSPYLERRVELLKPRLGARAWDAVYMYQAMVSIRQAVGRLFRKPEDRGVLVFLDRRYA
EPELWTNLADLLTGSLVVQDVEEAMGAVEKFNASTATAR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcttcccctacgcagaggcccggcagtttcaacgcgagatttatgaaaaggta
tacgacgcgcttcgccgcggcgcggcggcgctgatcaacgcgccgacgggcctcggcaag
acttcggcggtgctcgccgccgccgtgaagtacatgctggagacgggagtccgcgtgcac
tacgccgtgcggacgcgggctgagctagagccgccggtgagggagctggccaagatacgt
caactgggggccgactttaactacatcgtcatcaagagcaagcaagacatgtgctgctac
ccacagatccgaaaactcagctacttggagtttctcgccgagtgtagccttcttaagagc
ctcgggaggtgcgcctattatccaccgggggatgtggacgtgcctttgaaaaacgtcgct
acatatgtaaaactcctctgcgcctcgaagacatgtccctatgaatacgccaagaggaag
ctcgacgaggcagaggtcgtgatttctacatactactacatcttcggtagagaggaagcc
cagacgaagggcaaggtggttatcatagacgaggcacacgccttatttgacgccgttgtc
cacctccacagcataaagattagcgaaggcgagctgaggcaggcgtacagagaggcgcgt
aaatacggctacgtggaagaggccgcgaagatatacgccatatatacctacgtaaaaaag
gctgagggcaacgtcgacctcggcgatcttgcgggtctggtggccgatttacaacttgac
gatgctattagagaaattacgaaaaggaaaacggagagtttgcttaacccctacactccg
ctcctcctcgtgaaggagcttagagacgccatcaagaacaggcggcgccaccacgcccag
gtggagtatgtagagggcttgaggacactcgccctctacccgctcgatccaacctcgatt
gtgagagagaagctacgcggcgcgcacagcgtcgtttatataagcggcacgttgccaata
gggctcttcgccgaggcgctcgccctatctaattacgaggagctagacgtccccttcaat
aagtacatccccagagagaactacctctcaatagtagatgtgggagtcactacgaaatac
gccgaaagaggcgaggagatgtacctaaaaatagccaagaggctggccgcctgtataaac
gcgtctccccgcggcgttctggcggtattcccctcatacgaagtaatgaagggagtgaag
aagtatctcaaaatctcgataccccactggtacgaagacggcggagaggtctccttggcg
gacatcccagagaagttcttcataggtgccgtggccaggggaaggtacacagagggggtc
gagtacaccagagacggagccaatctactctccacagtggtaatagtgggcgtcccatat
cccgagcccagcccctacctagagaggagagtggagctcctcaagcctagacttggagcc
agggcgtgggacgctgtctacatgtaccaggcgatggttagcataagacaggcggtgggt
aggctcttcagaaagccggaggacaggggggtgcttgtcttcctcgacagacgctacgcc
gagcccgagctctggacgaacctagccgacctgctcacgggttctctggttgttcaagac
gtggaggaggccatgggggctgtggagaagttcaacgcctcgacagcaaccgccagatag
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