Pyrobaculum ferrireducens: P186_2179
Help
Entry
P186_2179 CDS
T01670
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
pyr
Pyrobaculum ferrireducens
Pathway
pyr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P186_2179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyr03021
]
P186_2179
Enzymes [BR:
pyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P186_2179
Transcription machinery [BR:
pyr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
P186_2179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
CpXC
Zn_ribbon_9
MqsA_antitoxin
Ribosomal_L32e
Zn_ribbon_ZPR1
Motif
Other DBs
NCBI-ProteinID:
AET33571
UniProt:
G7VB74
LinkDB
All DBs
Position
1812589..1815243
Genome browser
AA seq
884 aa
AA seq
DB search
MSLREEFDTIPRKVIKSIKFGVLSPEIIRKYSVMEVTTSEVYDEGGLPVRGGIADRRLGV
AEPGARCETCGQTHDVCPGHFGHIELVKPVVHVGFARVIYDILRTTCPNCGRIMLKDEEI
ERYRERLTKLKKRWRLLAQNLHEKIRKKAAERVTCPHCGYKKNKIRFERPYYFYEETEDG
ALVKLDPEILRERLAKVPGEDLELLGINSSVARPEWAVLKVLPVPPPHVRPSIQLETGIR
SEDDLTHKLVDIIRMNEKLKIAIETGAPTNVVDNLWDLLQYHVATYFDNELPGIPVAKHR
GGRPLKGIAQRLKGKEGRFRGSLSGKRVNYSARTVISPDPHIGINEVGVPYDIAKVLTVP
ERVTAWNVDVLREYVIRGPETWPGANYVITPEGRRIDLRYVKDKKTLAERLSPGWIVERH
LIDGDIVLFNRQPSLHRVSIMGHLVKVLPGRTFRLHLAVCPPYNADFDGDEMNLHVPQTE
EARAEARTLMLVERHIITPRYGGAIIGARQDYIIGAYLLSLKTTFLTKKEVAFLLGAGKS
GEDPPEPAILHPVELWTGKQIISHFLPRDLNWVQPTAFKSRCQDAYTCPTDEWIIIINGN
MVKGVLDKKSIGAEQVDSLWHRIARDYPPEVARRWLDSSLRLFLRYLDLRGFTFGMDSIY
IPPEAYEEIDKIVEESLKKVESLIGDFRSGRLEAMPGFTVEETFENKVTEILSRVREDAA
VVVEKNIDKNSEGYLMAKTGARGSIVNIVQMVATLGQQTIRGERIRRGFRTRTLPHFPVG
DIGAFSGGFVRSCFRCGLTPVEYFFHAAAGRDGLIDTAVRTAQSGYMQRRLINALQDVYV
AYDGTVRFGGAMLLQLLYGEDGVDVSRSDHGRVTDIKSLKMSIR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgttaagagaggagtttgatactatacctagaaaggtaattaagtctatcaagttc
ggcgtcctcagcccggagattattaggaaatactcagtgatggaggtcacgacttctgaa
gtatatgacgagggtggcctgccggtgcgtggggggattgccgacaggcggcttggggtg
gctgagccgggggcgcggtgcgagacatgtggacaaacacacgacgtatgtcctgggcat
ttcggccatattgaattagtcaagcctgtggtgcatgtggggttcgcccgcgttatctac
gacattctgcgaaccacctgccccaactgcgggcgtataatgcttaaggatgaggagata
gagaggtacagagagaggcttactaagcttaagaagaggtggaggctacttgcgcaaaac
ctacacgagaagattaggaagaaggccgccgagcgtgtgacgtgcccccactgcggctac
aagaagaacaagataaggttcgagcggccgtattacttctacgaggagactgaagacggc
gccttggtgaagcttgaccccgagattttgagggagaggctggccaaagtgcccggagag
gacttggagctcctcggcataaactcctctgtggcgaggccggagtgggcagttttgaaa
gttctgcccgtcccgcctccacatgtgagaccgtctatacagcttgagactggtattagg
tctgaggacgacttgacgcacaagctcgttgatatcattaggatgaatgagaagttgaag
attgccattgagacgggcgctcctactaacgtagttgacaacttgtgggatttgttgcag
taccacgtagctacttatttcgacaacgagctaccgggcatccccgtggctaagcacaga
ggcgggaggcccctcaaggggattgcacagaggctaaaggggaaggaggggaggttcaga
ggctcgctctccggcaagcgtgtgaactactcggcacgcaccgtgataagcccagatccg
catataggcataaacgaggtaggggtgccctatgacatagctaaggtgttgaccgtgccg
gagagggtaactgcgtggaatgtagacgtcttgagagagtacgtcattagaggacctgag
acttggccaggtgctaactatgtcattacgccagagggccggaggatcgacttgcgctac
gtcaaggacaagaagacactcgccgagaggctatcccccggctggatcgtggagaggcac
ttgatagatggcgacattgtgcttttcaaccgtcagccgagtctacacagagtttcaata
atgggccacctagtcaaggtgttgcccggccggacttttaggctccacctggctgtctgc
ccgccgtataacgccgacttcgacggagacgagatgaatctacacgtgccgcagacagag
gaggctagggctgaggctaggacgttgatgttggtagagagacatattatcaccccacgc
tacggaggcgccataattggcgcaagacaagactacatcataggggcctacctgctgtcg
cttaaaactaccttcttaaccaagaaggaggtcgccttcttgctgggggccggcaaatcg
ggtgaggacccgccggagcccgcgattctacacccggtggagctgtggactgggaagcag
ataatttcccactttcttccaagggatctcaactgggtgcaacccacggcatttaagtcc
aggtgccaagacgcctatacctgccccactgacgagtggattataattatcaacggcaac
atggtgaagggcgtgcttgacaagaagtcgatcggcgcggagcaggtagattcgctctgg
catagaatcgcccgggactacccgcccgaggtggccaggaggtggctagactcctcgttg
cggctcttcctgaggtatctagacctgcggggcttcaccttcggcatggattccatatat
ataccgcctgaggcttatgaagagattgacaagatagtggaggagagcttaaagaaggtc
gagagtcttatcggtgattttagaagcgggcggctggaggcgatgcctgggttcaccgtg
gaggagacatttgaaaacaaggtgactgagatactgtcaagagttcgcgaagacgccgct
gttgtggttgagaagaatattgataaaaactctgagggctacctaatggcgaagacgggg
gcgagggggagcatcgtaaatatagtacagatggtggctacattgggacagcagacgata
agaggtgagagaattaggcgcggctttaggactaggactctaccccactttcccgtagga
gacataggtgcgttttccggcggctttgtgaggagctgttttagatgcggccttacgccg
gttgagtacttcttccacgccgccgctgggagagacgggttgatagatacggctgtgcgt
acggcgcagtcaggttatatgcagaggcgcctcataaacgcgcttcaagacgtctatgta
gcctacgacggcaccgtcagattcggcggtgccatgcttctccaactgctgtacggcgaa
gatggcgtggatgttagccgctcggaccacggcagggttaccgatataaagtcgcttaag
atgtcgataagatga
DBGET
integrated database retrieval system
