Pyrobaculum ferrireducens: P186_2325
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Entry
P186_2325 CDS
T01670
Name
(GenBank) H/ACA RNA-protein complex component Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pyr
Pyrobaculum ferrireducens
Brite
KEGG Orthology (KO) [BR:
pyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyr03016
]
P186_2325
Enzymes [BR:
pyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
P186_2325
Transfer RNA biogenesis [BR:
pyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
P186_2325
Prokaryotic type
P186_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DNA_ligase_A_C
UPF0113
GARP
Motif
Other DBs
NCBI-ProteinID:
AET33715
UniProt:
G7VBU8
LinkDB
All DBs
Position
1941519..1942511
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AA seq
330 aa
AA seq
DB search
MRCGTREVFVKVEESTNPQWGKPPSQRSAEEHIRYSMVVLDKPRGPSSHEVAAWVKKILG
VDRAGHAGTLDPKVSGVLPIAVAEGTKVLMALSRSDKVYVAVAKFHGGVDAERLRAVLQE
FQGVIYQKPPLRSAVKRQLRTRHVYSLELLELDGRYAVIKMHVEAGTYARKIIHDIGEVL
GVGANMRELRRVAVSCYSEDEAVTLQDVADAYHIWRRYGDDTYLRRVLLPIEEAARHLPK
IWVRDSAVDALCNGAPLAAPGVSKFETPFSAGDLVAMFTLKGELIGVGRALVSSEEVKKM
DRGLVVRTDRVVMRRGTYPAMWKRGTRAKT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtgcgggactagggaggtttttgtaaaagttgaggagtctacgaatcctcagtgg
ggtaagccgccgtctcagagatctgctgaggagcatataagatactccatggttgtactg
gacaagcctagggggccgagtagccacgaggtggccgcctgggttaagaagattcttggc
gtggacagggctggccacgcggggacgctggatccgaaagtctcgggggttttgccgata
gcggtggctgaggggacgaaggttttgatggcgctttcccggtcggacaaggtttacgta
gccgtggcgaagttccacgggggcgtcgacgcggagaggcttagggcggttttgcaggag
ttccagggcgtgatctaccagaagcctcctctgcggtccgccgtcaagaggcagttgcgc
actcgccacgtgtattcgcttgagcttttagagctggacggccggtacgccgttattaaa
atgcacgtcgaggctgggacatatgcgcggaagattatccacgacataggggaggttctg
ggggtgggcgccaacatgagggagctgaggcgcgtcgccgtttcgtgctactccgaggac
gaggcggtgactctgcaggacgtggcggatgcgtaccatatatggaggcgctatggagac
gacacatacctgaggagggttttgttgcctattgaggaggcggctaggcacctccccaag
atatgggtaagggacagcgctgtcgacgcgttgtgcaacggcgcccccctcgccgcgccc
ggcgtgtcgaagttcgaaactcccttctccgcgggggatctcgtggcgatgtttacgctc
aagggagagctcattggagtcggcagagcgttagtaagctccgaagaggttaaaaaaatg
gatagaggcctcgtcgtgcgcacggatagagttgtgatgaggcgtggtacctacccggcg
atgtggaaaagagggacgagggcaaaaacttaa
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