Pyrococcus sp. ST04: Py04_0845
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Entry
Py04_0845 CDS
T02124
Name
(GenBank) DNA repair helicase rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pys
Pyrococcus sp. ST04
Pathway
pys03022
Basal transcription factors
pys03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pys00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Py04_0845
09124 Replication and repair
03420 Nucleotide excision repair
Py04_0845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pys03021
]
Py04_0845
03036 Chromosome and associated proteins [BR:
pys03036
]
Py04_0845
03400 DNA repair and recombination proteins [BR:
pys03400
]
Py04_0845
Enzymes [BR:
pys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Py04_0845
Transcription machinery [BR:
pys03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Py04_0845
Chromosome and associated proteins [BR:
pys03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Py04_0845
DNA repair and recombination proteins [BR:
pys03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Py04_0845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
Terminase_6N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFK22437
UniProt:
I3RDX7
LinkDB
All DBs
Position
complement(848690..850609)
Genome browser
AA seq
639 aa
AA seq
DB search
MLEYFPYKSLRPNQKEFIELVRESVKKGESLIVEAPTGFGKTISVLAGVLPYAISFGYKV
IYLARTHKQMDRVIEELKAIRSVARVSGVEFRSRKDLCLHSYIQTFAQDAYTSMIVCKSL
RKLGKCQFFENIKSKKEQVKEIIEFFLERPSFPSEVLEYSQLLELCPYEITRKVGEKANV
IVASYLYMINPWIRQAFMDSLGVDYSDLIIIFDEAHNVPDQAISALSDRLSVRSIERAIK
EAHEYGEDDIEQFLLVFLKGLEIIYNKRLENYETPEVPLKPEEIFEHPLFILGYSSKDLV
EIINYMVEIGDAIREDKIERNLPPRSYVGRVGEFLWNWLSLAGREDYLHLFSRERNLALE
LVALDPSVALDFLKEVHSAIFMSGTLTPLEAFRDIIGVEAKTKKFPRMVKSENAIVLVAR
DVSTRGEERSPSLYKKIAEYILEAVSIIPKNVGVFTASYEVLEGILSTNVHIKIEEDIGK
KVFIEKKDATSRENDAMIAEFKKEAKKEGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIP
YARPTPRVQAQIRYFEKKFPGKGRYYGYILPAHRKLAQAAGRVHRSAEERGSIVILDYRA
LWNNVKKDLPDWIVETMQPVTLPLMKIKLKRFWRLGNEH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagtactttccctataaatcactcagaccaaatcagaaagaattcattgaatta
gttagggaaagcgtgaaaaaaggagaaagcctaatagtcgaggccccaacaggctttggc
aaaacaatcagcgttcttgctggagttttaccctatgcaatttccttcgggtataaggtt
atatatcttgccagaactcacaaacagatggatagagtcatagaagagcttaaagcaata
agaagcgttgcacgagttagcggagttgagtttagaagcagaaaagacctctgtctccac
agctatatccaaacctttgctcaagatgcatacacaagtatgatcgtatgcaaaagtctg
agaaagctcggaaaatgccagttttttgaaaatataaagagcaaaaaagaacaagtcaag
gagatcatagaatttttcctcgaaagaccttcatttccaagcgaagtccttgagtattct
caactgctggaactttgtccatacgagataacaaggaaagttggagaaaaagctaacgta
atagtggccagctacctctacatgataaacccatggataagacaggcctttatggacagt
ctgggagttgattactctgatttaataataatattcgatgaagcacataacgttcccgat
caggctatctccgccctaagtgacaggttaagtgtaagaagtatcgaaagggctattaaa
gaggcccatgagtatggagaagatgatatagagcagtttctcttagtattcctcaaaggc
ctagagataatatacaacaaaagacttgaaaattacgaaaccccagaagtccccctaaag
ccagaagaaatctttgagcatccactctttattttaggatattcaagcaaagacctcgtg
gagattataaactatatggtcgaaattggagacgcaataagggaggataaaattgaaaga
aaccttccccctagaagttatgtgggaagggtaggggagttcttatggaactggctttct
ctggcaggaagggaggattatctccacttattcagcagggaaagaaaccttgctttggaa
ctagtggctttagatccttcagttgccctagatttccttaaagaggttcattctgcaata
tttatgtcggggacactaacacccctagaggcttttagggatataatcggtgtggaggca
aagaccaagaagttcccgagaatggtaaagtcagaaaatgcaatagttctagttgccaga
gacgtttcaacgagaggagaggaaagaagcccctcattatataagaaaattgccgagtat
atcctcgaagccgtaagcataattccaaagaacgttggggtatttacggcatcatatgaa
gtccttgaggggattttgagcaccaacgttcacattaaaatcgaggaagatattggaaag
aaggtgttcattgaaaagaaagatgcaacatcaagagaaaatgatgcaatgattgcagag
tttaaaaaagaggctaaaaaagaaggagcagttctttttggagtcatgggtggaaggaac
agcgaaggacaggattactcgggagatgaaatgaacggggttgtcttagttggcataccc
tatgctaggccaactccaagggtccaggcccaaattagatactttgaaaagaaattcccg
gggaaaggaagatattacggatatatactcccagctcatagaaagcttgctcaagccgct
ggaagagttcatagatccgccgaggagagaggaagcatagtaatcctcgattacagagct
ctatggaataatgttaaaaaagaccttcccgattggattgttgaaacgatgcaaccagta
acgttacccctaatgaagataaagcttaaaagattttggaggcttggaaatgagcattaa
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