KEGG   Pyrococcus sp. ST04: Py04_1094
Entry
Py04_1094         CDS       T02124                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
pys  Pyrococcus sp. ST04
Pathway
pys03030  DNA replication
pys03410  Base excision repair
pys03420  Nucleotide excision repair
pys03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Py04_1094
   03410 Base excision repair
    Py04_1094
   03420 Nucleotide excision repair
    Py04_1094
   03430 Mismatch repair
    Py04_1094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pys03032]
    Py04_1094
   03400 DNA repair and recombination proteins [BR:pys03400]
    Py04_1094
DNA replication proteins [BR:pys03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Py04_1094
DNA repair and recombination proteins [BR:pys03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Py04_1094
   MMR (mismatch excision repair)
    Other MMR factors
     Py04_1094
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Py04_1094
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Hus1 Rad9 DNA_pol3_beta_3 Suv3_N
Other DBs
NCBI-ProteinID: AFK22669
LinkDB
Position
complement(1104972..1105721)
AA seq 249 aa
MPFEIVFEGAKEFAQLIETASRLIDEAAFRVTEEGISMRAMDPSRVVLIDLNLPASIFSK
YEVDGEETIGVNMDHLKKVLKRGKAKDTLILKKGEENFLEISLQGTATRTFRLPLIDVEE
VEVDLPELPFTAKVVVLGDVLKEAVKDASLVSDSLKFIAKENEFTMRAEGETQEVEIKLT
LEDEGLLDLEVEEETKSAYGVSYLADMVKGIGKADEVTIKFGNEMPMQMEYYIRDEGRLT
FLLAPRVEE
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccatttgaaatagtctttgagggagcaaaagaattcgctcagcttatagaaacagca
agcaggctaatagacgaggctgctttcagagttactgaagaaggaataagcatgagggca
atggatccaagcagggtcgttctaatagatcttaacctccctgcaagtatattctctaag
tacgaggttgatggagaggaaactattggagtgaatatggatcacttaaagaaagtcctc
aaaagaggaaaggctaaagatactcttatattaaagaagggagaggagaactttcttgaa
ataagccttcagggaacagccaccagaacgtttagacttcctttgattgatgtggaagaa
gtcgaagtagatcttcccgagcttccattcacggccaaagtcgtagttcttggtgacgtt
cttaaagaggcagtaaaagatgcatcccttgtaagtgacagccttaagttcatagccaag
gagaatgagttcacaatgagggcagagggagagacgcaggaagttgaaataaagctgact
ctagaggacgagggtttgcttgatttagaagttgaagaggaaacaaagagtgcatatgga
gtcagctaccttgcggatatggttaagggaattggaaaggcagacgaggtaactataaag
ttcggaaatgagatgcccatgcagatggagtactatatcagggacgagggtaggctaaca
ttcctacttgctccaagagttgaggagtga

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