KEGG   Pyrococcus sp. ST04: Py04_1337
Entry
Py04_1337         CDS       T02124                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pys  Pyrococcus sp. ST04
Pathway
pys03030  DNA replication
pys03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Py04_1337
   03410 Base excision repair
    Py04_1337
   03450 Non-homologous end-joining
    Py04_1337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pys03032]
    Py04_1337
   03400 DNA repair and recombination proteins [BR:pys03400]
    Py04_1337
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pys04147]
    Py04_1337
DNA replication proteins [BR:pys03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Py04_1337
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Py04_1337
DNA repair and recombination proteins [BR:pys03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Py04_1337
Exosome [BR:pys04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Py04_1337
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc_N HHH_5 DUF7028 5_3_exonuc
Other DBs
NCBI-ProteinID: AFK22911
LinkDB
Position
complement(1334436..1335461)
AA seq 341 aa
MGVPIGELVPRKEIELESLYGRKVAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSG
LFYRTINLMEAGIKPAYVFDGKPPEFKKRELEKRKEAREEAEIKWKEALAKGDIEEARKY
AQRATRVNEMLIEDAKKLLELMGIPVIQAPSEGEAQAAYMASKGKVYASASQDYDSLLFG
APRLVRNLTITGKRKLPGKNIYVEIKPELIVLDEVLSSLKLTREKLIELAILVGTDYNPG
GIKGIGPKKALEIVRHSKDPLAKFQRQSDVDLYAIKEFFLNPPVTDDYKLQWREPDEEGI
LRFLCDEHDFSEERVKNGLERLKKAVKAGKQSTLESWFMKR
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggagttcccataggagagctggttcctaggaaggagattgaactcgagagtttatat
ggaagaaaagtagctatagatgcacttaacgctatttaccaattcctttcaacaataaga
cagagggatgggactcctcttatggactctaagggaaggataacatcacacttgagtgga
ctgttttacaggacaattaaccttatggaagctggtataaagcctgcatacgtctttgat
ggaaagcctccagaattcaaaaagagggagctagagaaaagaaaagaggcgagagaagaa
gcggaaatcaaatggaaagaagcgttagctaagggggacatcgaagaggcccggaaatat
gcccagagagcaactagagtaaatgagatgctgatagaggatgccaaaaagttgcttgag
ctaatgggaattcccgtgattcaggcccccagtgaaggagaggcccaagcggcatatatg
gcatcaaagggaaaggtttatgcctctgcaagtcaagattacgattctctcctctttggt
gctccaagactagtcagaaacttaacgataactggaaagaggaaacttcctggcaagaac
atctacgttgagataaaacctgagctgatagttcttgatgaagttctcagctcgctcaag
ctaacaagagagaagttaattgagcttgccatcttagtcggcactgactacaatcctggc
gggataaaaggcataggaccaaagaaggcgttagaaatagtaagacactctaaggatcca
cttgcaaagttccagagacagagtgatgtagatctttatgcaataaaggagttctttctg
aaccctcccgtcacggatgattataaattgcaatggagagagccggatgaagagggtatt
ctaaggttcttgtgcgatgagcatgacttcagtgaagaaagagtgaaaaatggtttagaa
aggctcaaaaaggcagtaaaagctggaaaacaatctacgcttgaaagttggtttatgaaa
agatga

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