KEGG   Pyrococcus sp. ST04: Py04_1471
Entry
Py04_1471         CDS       T02124                                 
Name
(GenBank) putative peptide chain release factor 1
  KO
K03265  peptide chain release factor subunit 1
Organism
pys  Pyrococcus sp. ST04
Pathway
pys03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pys00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Py04_1471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pys03019]
    Py04_1471
   03012 Translation factors [BR:pys03012]
    Py04_1471
Messenger RNA biogenesis [BR:pys03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     Py04_1471
Translation factors [BR:pys03012]
 Eukaryotic type
  Release factors
   Py04_1471
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 baeRF_family10 acVLRF1 Zn_ribbon_3 HypA TssR_VWA Zn_ribbon_8 TetR_C_26
Other DBs
NCBI-ProteinID: AFK23043
UniProt: I3RFN3
LinkDB
Position
complement(1460109..1461353)
AA seq 414 aa
MVHRDAQLYELKKKIDELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKT
TRKNVLGALERAMQHLKLYKKTPENGLALFVGNVSEMEGTTDIRLWAIIPPEPLNVRLYR
CDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGILRGKRIEVIDELTSNVPGKTRAGGQS
ARRYERIREQETHEFMKRIGEHANRAFLPLLEKGELKGIIVGGPGPTKEEFVEGDYLHHE
LKKKIIGVVDISYHGEYGLRELVAKASDILRDHEVIRERKLVNEFLKHIVKDTGLATYGE
REVRRALELGAVDTLLISEGYNKVRVRAKCNNCGWEELKTMSEEDFEVYKRKLTRCPKCG
SQNISFEKWDVAEELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLGALLRFKI
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggttcaccgtgacgctcaactttatgaactaaagaagaagattgacgagctaaagaaa
attagagggcgaggaactgagttaatatccctctatattccagcgggatatgatttgagt
aaagtcatgcaacaactcagagaagagtatagcacagcccagaacataaaatcaaaaaca
actagaaagaacgtgctgggggccctagaaagagcaatgcagcatctcaaactttacaaa
aaaactccagaaaatggacttgctctgttcgttgggaacgttagtgagatggagggaacg
actgatattagattgtgggcaataattcctccagagcctctgaatgtgagactctatcga
tgtgaccagacgtttgttacagagccactcgaagaaatgcttagggtgaaggatgcctat
ggattaattacagtggagaaaaatgaggctacgataggtattcttaggggtaaaagaatt
gaagttattgatgagctcacttcaaatgtcccaggtaaaaccagggcaggtggtcagtct
gcaaggcgttatgagaggataagggagcaggaaactcatgaatttatgaagaggatcgga
gagcacgctaacagagcgtttcttccgctccttgaaaaaggggagcttaagggtattata
gtagggggcccaggaccgacaaaggaggaattcgttgagggagattacctacaccacgaa
cttaagaagaaaataattggagtagtagacattagttatcatggtgaatacgggctcagg
gaattagttgctaaggcctctgacattcttagggatcacgaggtaataagggagaggaaa
cttgtaaatgagttcttgaagcacatagtcaaagacaccggtctagccacatatggtgaa
agggaagtgagaagagcgcttgaattgggagccgttgacactttactgattagtgaggga
tataacaaggtcagggttagggctaaatgtaacaactgtggttgggaagagctgaaaacc
atgagcgaggaagacttcgaagtctacaagagaaagttgacaagatgtccgaagtgtgga
agtcagaacatatcatttgaaaagtgggacgttgcggaagaactaataaaaatggcagag
gaagcggggtcagatgtggaaataatctcccttgacaccgaggaaggacagcagttctat
cgagcctttggtggattgggggcgttgcttagatttaagatttag

DBGET integrated database retrieval system