Pyrococcus sp. ST04: Py04_1491
Help
Entry
Py04_1491 CDS
T02124
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pys
Pyrococcus sp. ST04
Brite
KEGG Orthology (KO) [BR:
pys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pys03016
]
Py04_1491
Enzymes [BR:
pys01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Py04_1491
Transfer RNA biogenesis [BR:
pys03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Py04_1491
Prokaryotic type
tRNA splicing ligases
Py04_1491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AFK23063
LinkDB
All DBs
Position
complement(1475807..1477141)
Genome browser
AA seq
444 aa
AA seq
DB search
MRSDRTLEQAANVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFDVKEGVISPGGIGYDIN
CGVRLIRTNLTEKEVRPKIKQLVDTLFKNVPSGVGSQGRIRLHWTQIDDVLVDGAKWAVD
NGYGWERDLERLEEGGRMEGADPDAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKIYDEE
VAKAYGLFEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEE
GQRYFSAMKAAANFAWANRQMITHWVRESFQEVFRQDPEGDLGMDIVYDVAHNIGKVEEH
EVDGKKVTVIVHRKGATRAFPPGHEAIPRIYRDVGQPVLIPGSMGTASYVLAGTEGAMKE
TFGSTCHGAGRVLSRKAATRQYRGDRIRNELLQRGIYVRAASMRVVAEEAPGAYKNVDNV
VKVVSEAGIAKLVARMRPIGVAKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtgatagaactcttgaacaggccgccaacgttgcaatgttgccagggatatac
aagtattcaattgtaatgccagatggtcaccaaggatatggatttccaattggtggtgtt
gcagccttcgatgttaaagaaggagtcataagcccagggggtattggttacgacatcaac
tgtggtgtgcgtttaatcagaacaaatctaactgagaaagaggtcagaccaaagataaag
caacttgtcgataccctcttcaaaaacgttccctctggcgttggtagccagggtagaata
aggcttcactggacgcaaattgacgatgttcttgttgatggggcaaagtgggcagtagac
aatgggtatggttgggagagagatttggagaggttagaagaaggaggaaggatggaaggt
gcagatccagatgccgtgagtcagagggccaagcagagaggagcaccccagctaggttca
ctgggctctggaaaccacttccttgaagttcaggttgttgataagatttacgacgaggaa
gttgccaaggcatatggcctttttgagggacaagttgttgtaatggttcacactggttca
agaggtctaggtcaccaggtagcaagtgactacttgagaatcatggagagagctatcagg
aagtacaggattccttggccagacagagaacttgtcagtgtcccattccagagtgaagaa
ggtcagagatacttctcagcaatgaaggccgcagcaaactttgcgtgggcaaatagacag
atgataacacactgggtaagggagagtttccaggaggtattcaggcaagatccggaggga
gaccttggaatggacatagtttacgatgttgctcacaacattggtaaagtcgaagagcat
gaagtagatgggaagaaggtcactgtaatagttcacaggaagggtgcaactagggcattt
cctccaggacatgaggcaattccaaggatatatagggatgttggccagcccgtcttgata
ccgggttcaatgggtacagcaagctacgttttagctggaaccgagggtgctatgaaagag
acctttggaagcacctgccacggagctggaagagttctcagtagaaaagccgcaacgaga
cagtacagaggggacaggataaggaatgagttattgcagagaggaatctatgtaagggct
gccagcatgagagtagttgctgaggaggctccaggagcttacaagaatgtcgacaatgtt
gttaaagtcgttagtgaggcaggaattgcaaaattagttgcaagaatgaggcctatcgga
gtagcaaagggttga
DBGET
integrated database retrieval system
