Pyrococcus sp. ST04: Py04_1770
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Entry
Py04_1770 CDS
T02124
Name
(GenBank) cell division protein CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pys
Pyrococcus sp. ST04
Pathway
pys04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Py04_1770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pys03019
]
Py04_1770
03009 Ribosome biogenesis [BR:
pys03009
]
Py04_1770
04131 Membrane trafficking [BR:
pys04131
]
Py04_1770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pys04147
]
Py04_1770
Messenger RNA biogenesis [BR:
pys03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Py04_1770
Ribosome biogenesis [BR:
pys03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Py04_1770
Membrane trafficking [BR:
pys04131
]
SNARE
SNARE associated proteins
Others
Py04_1770
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Py04_1770
Exosome [BR:
pys04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Py04_1770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
AAA_33
Vps4_C
nSTAND3
AAA_28
RNA_helicase
AAA_24
Mg_chelatase
IstB_IS21
NPHP3_N
AAA_18
Sigma54_activat
nSTAND_NTPase5
DUF815
Parvo_NS1
Bac_DnaA
AAA_25
ATPase_2
AAA_7
AAA_17
ABC_tran
NB-ARC
TsaE
PhoH
Zeta_toxin
AAA_lid_PRS2_C
ATPase
SLFN-g3_helicase
Zot
AstA_C
DUF438
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
AFK23338
LinkDB
All DBs
Position
complement(1719129..1721519)
Genome browser
AA seq
796 aa
AA seq
DB search
MSERKEVKLKVASAYQRDVGRGIVRLDRKTMRELGISPGDVVEIIGTKNTAAVAWPAYPE
DEGLGIIRMDGTIRKNAGVGLGDEVIVRKAEVREAKKVTLAPTEPVRFGRDFVEWLHERL
IGRPVVRGDYIRVGVLGQELTFVVTATQPSGVVQITEFTDFNISEKPVKEVEKRMTTGVT
YEDIGGLHDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKRSEVTGEVEK
RVVAQLLALMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDREIEVGVPDKQGRKEILQ
IHTRGMPIEPDFRKVDVLRVLNDIKKEGKYKNIIDDAIKKVDLARDEEEIKKVLRDISTE
LYAEVKARLIDQLLEELAEVTHGFVGADLAALAREAAMAALRRLIREGKIDFEAESIPRE
VLEELKVTRKDFYEALKMVEPSALREVLIEVPNVHWDDIGGLEDVKQELREAVEWPLKYP
EAFRAYGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAVRGPEILSKWVGESEKNIR
EIFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRIINQLLTEMDGLVENSGVVVIAAT
NRPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNMPLAEDVSLEELAKKTEGYT
GADIAAVCREAAMIAMRRALEQGVLKEGMKAEEIRRIAKVTMKDFEEALKKIGPSVSKET
MEYYRRIQEQFKQARG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagaaaggaggtcaagcttaaggttgcttccgcttatcaaagggatgttggt
agaggtatagttaggttagacagaaaaacaatgagagagcttggcatctcacccggcgat
gtagtagagatcattggaaccaagaacaccgcggcggttgcatggccagcctatccagaa
gacgaagggctgggtataatcagaatggatggaaccataagaaagaatgctggagttggc
cttggagatgaggtaatagtcaggaaagcagaagttagagaagctaagaaagtaactttg
gctccaacagagccagtaaggttcggtagggacttcgtggagtggctacatgagaggcta
ataggcaggccagtagttaggggagactacatcagagtgggagtacttggccaggagcta
acatttgtagttacagcgactcagccaagcggagtagtgcagatcacggagttcactgac
ttcaacataagtgagaagccagtaaaggaagtcgagaagagaatgacaactggcgtgact
tatgaggacattggtggcctacacgatgtcatagagaagatcagagagatgatagaatta
ccccttaaacacccagagctctttgaaaagctaggtattgagcctcctaagggtgttttg
ttgtatggtccgcctggaactgggaaaacgttactggccaaggccgttgctaatgaggct
aacgcctacttcatagcaatcaacggtccagaaataatgagcaaatactacggagaaagc
gaagagaggctcagggaagtattcaaggaggctgaggagaatgccccggcaataatattc
atcgatgaaatcgacgcaatagctccaaagagaagcgaagttactggagaggtcgagaaa
agagtcgttgctcagttacttgccttgatggatgggctaaagagcaggggcaaggtcatt
gtcataggagctaccaacaggcctgatgctattgatccggctttgaggaggccgggtagg
tttgatagggagattgaggtcggtgttccagacaagcaaggaagaaaagaaatcctacaa
atccacacaagaggaatgccaatagaaccagacttcagaaaggttgatgtccttagggtg
cttaatgacattaagaaggagggcaagtacaagaatatcatcgatgatgcaataaagaag
gtggatcttgctagagatgaagaggagatcaagaaagtgcttagggacatcagcactgag
ctctatgccgaggttaaggcaagattaattgaccagctcctagaagagcttgccgaggtc
acccatggtttcgttggtgctgatctcgccgctcttgcaagagaggcagcaatggcggcc
ctaagaaggcttatcagggagggtaagattgacttcgaggcagagagcatcccaagagag
gtacttgaggagctcaaggttaccagaaaggacttttatgaggctttgaagatggttgag
ccttctgctttgagggaggtgcttattgaggtgcctaatgtccactgggatgacattggc
ggcctagaagacgtaaaacaagaactaagagaagcagtagaatggcctctcaagtatcca
gaggcattcagagcctatggaataacgccacctaagggaatcctgctctacggtccacca
ggaacaggaaaaacactactggctaaggccgttgctaccgagagcgaggcaaacttcata
gccgtcagagggccggagatactcagcaaatgggttggtgaaagtgagaagaacatcaga
gagatattcaggaaggcaagacaggccgcaccaaccgtgatattcatagacgagattgat
gcaatagccccaagaagaggaacagacgtcaacagggtaactgacaggataattaaccag
ctccttacggaaatggacggtctagttgagaacagtggtgtagtagttatagcagcaacc
aacagaccagacataatagatccggcattgctgagaccgggcaggtttgacaggctgata
cttgtgcctgcaccggacgagaaggcaagactagagatattcaaggtccacacgagaaac
atgccactggcagaagacgttagcctcgaggagcttgcaaagaagactgagggctacacg
ggagctgacatagctgctgtctgtagggaggctgcaatgatagcaatgaggagagccctt
gagcagggagtcctcaaggagggcatgaaggctgaagaaatcagaaggatcgccaaggtt
acaatgaaggacttcgaagaagctctcaagaagatagggccttcagtaagcaaggagaca
atggagtactacaggaggatccaagaacagttcaagcaggctaggggctga
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