Polynucleobacter yangtzensis: PKF023_00750
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Entry
PKF023_00750 CDS
T08788
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PKF023_00750 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyt03021
]
PKF023_00750 (rpoA)
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_00750 (rpoA)
Enzymes [BR:
pyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PKF023_00750 (rpoA)
Transcription machinery [BR:
pyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PKF023_00750 (rpoA)
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PKF023_00750 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF6165
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BDT76272
UniProt:
A0A9C7CX66
LinkDB
All DBs
Position
70569..71549
Genome browser
AA seq
326 aa
AA seq
DB search
MQTNLLKPKIISVEALTANQAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVAIAG
VVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEI
MNPDHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYNDEATKIIGRIVLDASFSPVSRVS
YAVESARVEQRTDLDRLVMTIETNGVLSPEEAIRQAASILVDQLVVFAALESSEVSGDLA
PSRSSMVDPMLMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKDVLAARGLSLGMKLESWPPANLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatttgctcaagccaaagattatttctgttgaagcgcttaccgccaaccaa
gcaaaggttgttatggagccgttcgagcgtggctatggccacacactcggaaatgcatta
cgtcgtgtactgttgtcctcgatggttggttatgcgccaactgaagtagctattgctggt
gttgttcatgagtactccacattggatggagttcaagaggatgtagttaacctcttgttg
aacctcaaaggtatcgtatttaagttgcagtcacgtgacgaagttactatcaatttgcgt
aaagaaggtccaggcgttgttactgcaaaagatatcgatttgccacatgatgtagaaatc
atgaatcctgatcacgtgatcgcccacttgtctgctggtggcaagttggacatgcagatc
aaggttgaaaaaggccgcggctatgttccaggtaacgtacgtcaatataacgacgaagct
actaagatcattggtcgtatcgtgttggatgcttcattcagcccggtaagccgtgttagc
tatgctgttgaatctgctcgtgttgagcaacgtaccgaccttgatcgtctcgtaatgact
atcgaaacaaacggtgtgttgtctcctgaagaagcaattcgtcaagcagctagcatcttg
gttgatcagttagttgtattcgcagctcttgagagcagcgaagtttctggtgatttggca
ccaagccgctcttcaatggttgatccaatgttgatgcgtccggtagatgatctcgagttg
acagttcgctctgcaaactgcttgaaggctgagaacatttactacatcggtgatttgatt
caacgtacagagaatgaattgttgaagacgcctaatctaggtcgtaaatctttgaatgaa
atcaaagatgtattggcggctcgtggcttaagtcttggcatgaaactcgaaagctggcct
ccagctaacctcgagaaataa
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