Polynucleobacter yangtzensis: PKF023_01710
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Entry
PKF023_01710 CDS
T08788
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00470
D-Amino acid metabolism
pyt00550
Peptidoglycan biosynthesis
pyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PKF023_01710 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PKF023_01710 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pyt01011
]
PKF023_01710 (murD)
Enzymes [BR:
pyt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PKF023_01710 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pyt01011
]
Precursor biosynthesis
Amino acid ligase
PKF023_01710 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox_3
CbiA
Motif
Other DBs
NCBI-ProteinID:
BDT76368
UniProt:
A0A9C7FJ95
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All DBs
Position
163103..164725
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AA seq
540 aa
AA seq
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MLILENTFANSAFMSDEGYQAPSRFLILGLGESGVAMAKWCLRNGAEVRLADTREQSLLS
ERQNAWLQELHIAGLKDTCFGPLSDDLLKGIDVIGISPGLSPVQDPIYSFLVKAEEAEID
VWSEIEFFARAISALGRMAQAQESSYEAAILAVTGTNGKTTTTALTGQLCERAGKKVAVA
GNISPAALEKLMSCLDLADQIVDMPDVWVLELSSFQLVYTHTLNVTAATVLNITQDHLDW
HGDMQAYADAKSRIFGADTVCILNRDDSLVMGLLSEEQKTEKSIVTFGSNRPDEQGAFGI
EHDLRAGGIDWLVWAEVDEDVEPKPKRRRKSAVVEDDEPLRLKRLIPADALRIRGRHNAL
NALAALALARAANLPMNLLLHGLRDYHGEPHRVQSIAIVKDVEYVDDSKGTNVGATVAAL
NGLGNNELGKRIWLIAGGDGKGQDFSPLREPALRFVKGAFVIGKDGVAIGESLGAGIPVT
NCGDLVTAVQTAAAQAISGDIVLLSPACASLDQFRDYKERAQVFAAEVEELGMRFEGVQA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgttgattttagaaaataccttcgctaattcagctttcatgagtgatgaaggctatcaa
gcaccaagccgattcctcattttaggtttgggtgaatctggtgttgcaatggctaagtgg
tgcttgcgtaatggtgcagaggtgcgtctcgccgacacccgtgagcaatcattattaagt
gagcgtcagaatgcttggttgcaagagcttcacattgcgggtctaaaagatacttgtttt
ggacctttgagtgatgacttactcaaagggattgatgtgattggtatcagcccagggctt
tctccggtgcaagacccaatttattcattcttggtaaaagctgaggaagctgaaatcgac
gtgtggagcgaaattgaattttttgctcgtgcaatttctgctttaggtcgcatggctcag
gcacaagagtctagctatgaggctgcgatattggcggtcactggtaccaatggcaaaaca
acgactactgcactaacgggtcaactctgtgagcgcgccggcaagaaagttgctgttgcg
ggaaacatcagccctgccgctttggaaaaattaatgagctgcttggacttggcagatcaa
attgtcgacatgcctgatgtttgggtgttggagttatccagtttccagctggtttatacc
cacaccttaaatgtaactgcagcaactgtgttgaatattacccaagaccatttggattgg
catggggatatgcaggcttatgcagacgctaagtctagaatatttggcgccgatacagtg
tgcatcctgaatcgtgacgactctcttgtaatgggcttgctttctgaagagcagaaaaca
gagaagtctattgtgacttttggctctaatcgtccagatgagcaaggcgcatttggtatt
gagcatgacttgcgtgctggaggtatagattggctagtatgggctgaagtagatgaggat
gtagagcctaagcctaagcgtcgtcgcaagtctgcggttgttgaggatgatgagccatta
cgattgaagcgcctcattccagctgatgcattaagaattcgtggtcgtcacaacgcctta
aatgccttggctgcgcttgcgttagcacgcgctgccaatttgccaatgaacttgttattg
catggtttgcgtgattaccatggcgagcctcatcgagtacaaagcattgcgattgttaaa
gacgttgagtatgtggacgatagtaaaggcactaatgtgggtgctactgttgccgcatta
aatggtttgggtaataacgaattaggaaaacgcatttggttaattgctggtggagatggt
aaggggcaagatttcagcccacttcgtgaaccagctttgcgttttgtaaagggcgccttc
gtgattggcaaagatggtgttgccattggcgaatcattaggcgctggaatacctgtcact
aattgtggtgacttagtgactgcagttcagactgcagctgcgcaggcaatatctggtgac
atagtgttgttatctccagcttgcgctagcttagatcagttccgtgactataaagaacgc
gctcaagtatttgctgcagaagtcgaagagttgggaatgcgctttgaaggggtccaggca
tga
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