Polynucleobacter yangtzensis: PKF023_02100
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Entry
PKF023_02100 CDS
T08788
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt02024
Quorum sensing
pyt03060
Protein export
pyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PKF023_02100 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PKF023_02100 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKF023_02100 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pyt02044
]
PKF023_02100 (ffh)
Enzymes [BR:
pyt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PKF023_02100 (ffh)
Secretion system [BR:
pyt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PKF023_02100 (ffh)
Eukaryotic Sec-SRP protein
PKF023_02100 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
T2SSE
nSTAND3
AAA_31
AAA_16
cobW
YqeC
ATP_bind_1
AAA_14
AAA_33
Thymidylate_kin
AAA_30
APS_kinase
Rad17
HMUD2
AAA_19
TsaE
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
BDT76407
UniProt:
A0A9C7CXB3
LinkDB
All DBs
Position
complement(202875..204257)
Genome browser
AA seq
460 aa
AA seq
DB search
MLENLTDRLSRVVKTMRGQARLTEANTAEMLREIRLALLEADVALPVVKSLLEQIKFKAL
GEEVVGSLSPGQALVGVVQRELAQVMMGDTNQSGELNLATQPPAVILMAGLQGAGKTTSV
GKLAKWLREKKKKKVLTVSCDVYRPAAIEQLETVTKQVGAEFFPSDVSQKPNDIALAALD
WARRHYFDVVLVDTAGRLGIDEVLMQEIKTLHASLNPIETLFVVDAMLGQDAVNTAKAFH
EALPLTGVILTKLDGDSRGGAALSVRQVTGVPLKFIGVAEKMDGLEAFDAERMANRILGM
GDILALVEQAQQHVDVAKAEKLASKISKGGFDLEDFRDQLMQMQKMGGMASLMDKLPSQM
AQAASKTNLSNADKQTTRMRGIIDSMTPQERRKPELLKASRKRRIAAGSGVEVQEVNRLL
AQFEQMQTMMKQFKGGKMARTMATMAAKGAAKGIGGLFKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaaacctcaccgaccgcctatctcgcgttgttaaaacaatgcggggccaagcc
cgccttactgaagccaataccgcagaaatgctgcgggaaatccgtttagccctattagag
gctgacgtagcgcttccagtagtgaagtcactgcttgagcaaattaaatttaaagccctt
ggcgaggaagtggttggaagcctcagcccaggacaagctcttgttggcgtagtgcaacgc
gaacttgcccaagtgatgatgggcgacaccaatcaaagtggtgaactcaatttagctact
caaccaccggcagtgatcttgatggcaggcttacagggtgcaggtaaaacgacctctgtt
ggcaagctagcaaaatggttgcgagagaagaagaaaaagaaagttctcaccgtttcatgc
gacgtctatcgtccagcggcgattgagcaattagaaactgttaccaagcaagttggtgct
gaatttttcccaagcgatgtcagccaaaaaccaaatgacattgcgctcgctgccctagat
tgggctcgtcgccactactttgacgtagtgctcgttgataccgcaggtcgccttggtatt
gatgaagtgctcatgcaagaaatcaaaactctgcatgccagccttaatccaattgaaacc
ttattcgtggttgatgcgatgctcggccaagatgccgtgaataccgccaaggctttccac
gaggcattgccactcactggcgtgattctgaccaagttagatggtgactcccgtggtggt
gcggcactctcagttcgccaagttactggtgtaccactcaaattcatcggcgtcgccgaa
aagatggatgggcttgaggcatttgatgctgagcgcatggcaaaccgtattctgggcatg
ggagatatccttgccttggttgaacaagctcaacagcatgtcgatgttgctaaagccgaa
aaattagccagcaagatttctaaaggtgggtttgatcttgaggatttccgcgatcaactc
atgcaaatgcaaaagatgggtggcatggccagcctgatggataagttgcccagtcaaatg
gcgcaagcggcttccaaaactaatttaagtaatgctgataaacaaactacacgcatgcgt
ggaattattgacagcatgacgcctcaagagcgcagaaagcctgaattactgaaagccagt
cgcaagcgtcgtattgctgcgggctctggcgtggaagttcaagaagtcaatcgcctgctc
gcacagttcgagcaaatgcaaaccatgatgaagcaattcaagggcggaaaaatggcgcgc
accatggccaccatggctgcaaaaggagccgccaaaggtattggcggactctttaagaag
taa
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