Polynucleobacter yangtzensis: PKF023_02630
Help
Entry
PKF023_02630 CDS
T08788
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00521
Streptomycin biosynthesis
pyt00523
Polyketide sugar unit biosynthesis
pyt00525
Acarbose and validamycin biosynthesis
pyt00541
Biosynthesis of various nucleotide sugars
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01250
Biosynthesis of nucleotide sugars
Module
pyt_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PKF023_02630 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PKF023_02630 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
PKF023_02630 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PKF023_02630 (rmlB)
00525 Acarbose and validamycin biosynthesis
PKF023_02630 (rmlB)
Enzymes [BR:
pyt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PKF023_02630 (rmlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
BDT76460
UniProt:
A0A9C7CBT7
LinkDB
All DBs
Position
259373..260431
Genome browser
AA seq
352 aa
AA seq
DB search
MILVTGGAGFIGGNFVLDWLKVPGNEGVINLDKLTYAGNLATLESLKKDSRHIFVHGDIG
DKELVTKLLKEHKPRAIVNFAAESHVDRSIHGPADFVETNIVGTFNLLECAREYWNALEG
KAKQEFRFHHVSTDEVYGSLSSTDPAFTETNPYEPNSPYSASKAASDHLVRAWFHTYGFP
VVTTNCSNNYGPYHFPEKLIPLVILNALNSKPLPIYGDGQQIRDWLYVGDHCSAIREVLA
KGKLGETYNIGGWNEKANIDVVKTICSILDELKPRADGKPYVDQITFVKDRPGHDRRYAI
DASKVERELGWRPAETFDTGIRKTVQWYLDNPVWIDGVVSGSYRDWLQKQYN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgtaactggtggtgctggcttcattggtggtaattttgtcctggattggctt
aaggttccgggcaatgaaggcgtaattaatcttgataaattaacctatgcaggtaacttg
gccacccttgagtccctcaagaaggattcccgccatatatttgttcatggcgatattggc
gacaaagaattagtaactaagttattaaaagagcataagccgcgtgcaatagtcaatttt
gctgccgaaagccatgtggatcgatccattcatgggcctgcagatttcgtggaaacaaac
attgttggcacattcaatttattagagtgtgctcgcgagtattggaatgctctcgaaggc
aaagctaagcaagagtttcgctttcaccatgtatcaactgatgaagtgtacggctcctta
tcttcgactgatcctgctttcaccgaaaccaatccttacgagcctaatagtccttactcg
gcttcaaaggctgcttcagatcatttagtgcgcgcttggtttcatacctatggatttccg
gtagtgacaaccaactgctcgaataactatggtccatatcacttcccggaaaaattaatt
ccgctggtgatcttgaatgccttaaatagtaagcctttgccaatttatggcgatggtcag
cagattcgtgattggctctatgtgggcgatcattgctccgccattcgtgaagtattggct
aagggtaaattaggtgagacatacaacatcggtggctggaatgaaaaagccaatatcgat
gttgtgaaaaccatctgcagcattctggatgagctcaagcctcgtgcagacggaaagccc
tacgtggatcaaattaccttcgtaaaagaccgcccaggacatgaccgtcgctatgcaatt
gatgctagcaaggttgagcgcgagttaggctggcggccagccgagacctttgataccggt
attcgtaaaacggtgcaatggtatctagacaacccagtttggattgatggagtggttagc
ggttcttatcgtgactggttacaaaagcaatataactaa
DBGET
integrated database retrieval system