KEGG   Polynucleobacter yangtzensis: PKF023_02630
Entry
PKF023_02630      CDS       T08788                                 
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pyt  Polynucleobacter yangtzensis
Pathway
pyt00521  Streptomycin biosynthesis
pyt00523  Polyketide sugar unit biosynthesis
pyt00525  Acarbose and validamycin biosynthesis
pyt00541  Biosynthesis of various nucleotide sugars
pyt01100  Metabolic pathways
pyt01110  Biosynthesis of secondary metabolites
pyt01250  Biosynthesis of nucleotide sugars
Module
pyt_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pyt00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PKF023_02630 (rmlB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PKF023_02630 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    PKF023_02630 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PKF023_02630 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    PKF023_02630 (rmlB)
Enzymes [BR:pyt01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PKF023_02630 (rmlB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 NAD_binding_4 RmlD_sub_bind 3Beta_HSD adh_short KR
Other DBs
NCBI-ProteinID: BDT76460
UniProt: A0A9C7CBT7
LinkDB
Position
259373..260431
AA seq 352 aa
MILVTGGAGFIGGNFVLDWLKVPGNEGVINLDKLTYAGNLATLESLKKDSRHIFVHGDIG
DKELVTKLLKEHKPRAIVNFAAESHVDRSIHGPADFVETNIVGTFNLLECAREYWNALEG
KAKQEFRFHHVSTDEVYGSLSSTDPAFTETNPYEPNSPYSASKAASDHLVRAWFHTYGFP
VVTTNCSNNYGPYHFPEKLIPLVILNALNSKPLPIYGDGQQIRDWLYVGDHCSAIREVLA
KGKLGETYNIGGWNEKANIDVVKTICSILDELKPRADGKPYVDQITFVKDRPGHDRRYAI
DASKVERELGWRPAETFDTGIRKTVQWYLDNPVWIDGVVSGSYRDWLQKQYN
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgattctcgtaactggtggtgctggcttcattggtggtaattttgtcctggattggctt
aaggttccgggcaatgaaggcgtaattaatcttgataaattaacctatgcaggtaacttg
gccacccttgagtccctcaagaaggattcccgccatatatttgttcatggcgatattggc
gacaaagaattagtaactaagttattaaaagagcataagccgcgtgcaatagtcaatttt
gctgccgaaagccatgtggatcgatccattcatgggcctgcagatttcgtggaaacaaac
attgttggcacattcaatttattagagtgtgctcgcgagtattggaatgctctcgaaggc
aaagctaagcaagagtttcgctttcaccatgtatcaactgatgaagtgtacggctcctta
tcttcgactgatcctgctttcaccgaaaccaatccttacgagcctaatagtccttactcg
gcttcaaaggctgcttcagatcatttagtgcgcgcttggtttcatacctatggatttccg
gtagtgacaaccaactgctcgaataactatggtccatatcacttcccggaaaaattaatt
ccgctggtgatcttgaatgccttaaatagtaagcctttgccaatttatggcgatggtcag
cagattcgtgattggctctatgtgggcgatcattgctccgccattcgtgaagtattggct
aagggtaaattaggtgagacatacaacatcggtggctggaatgaaaaagccaatatcgat
gttgtgaaaaccatctgcagcattctggatgagctcaagcctcgtgcagacggaaagccc
tacgtggatcaaattaccttcgtaaaagaccgcccaggacatgaccgtcgctatgcaatt
gatgctagcaaggttgagcgcgagttaggctggcggccagccgagacctttgataccggt
attcgtaaaacggtgcaatggtatctagacaacccagtttggattgatggagtggttagc
ggttcttatcgtgactggttacaaaagcaatataactaa

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