Polynucleobacter yangtzensis: PKF023_02730
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Entry
PKF023_02730 CDS
T08788
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00250
Alanine, aspartate and glutamate metabolism
pyt00310
Lysine degradation
pyt00350
Tyrosine metabolism
pyt00650
Butanoate metabolism
pyt00760
Nicotinate and nicotinamide metabolism
pyt01100
Metabolic pathways
pyt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PKF023_02730 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PKF023_02730 (gabD)
00310 Lysine degradation
PKF023_02730 (gabD)
00350 Tyrosine metabolism
PKF023_02730 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PKF023_02730 (gabD)
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PKF023_02730 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PKF023_02730 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PKF023_02730 (gabD)
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Motif
Pfam:
Aldedh
Cecropin
Motif
Other DBs
NCBI-ProteinID:
BDT76470
UniProt:
A0A9C7F9P3
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Position
complement(268975..270447)
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AA seq
490 aa
AA seq
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MQKVDIRAQLKDSSLFKEAAFINGQWFDSKNTFAVNNPATDEVIANVANLATTDADLAIT
AAEKALPAWRSKLAKERALIMRKWFDLIIANTQDLATLMTLEQGKPLAEAAGEVAYGASF
VEWFAEEAKRVEGSILSTTWGDKRLMVLKQPIGVCVAITPWNFPIAMITRKIAPAMAAGC
TIVIKPAELTPLSALALAELAKRAGVPDGVINIITADANQSIAIGKTLCASPIVRHLSFT
GSTEVGRILMEQCAPTVKKLALELGGHAPFIVFDDADIDAAVIGAMASKFRNSGQTCVCA
NRFYVHKKVQDAFVEKFAKALETIKVGNGMQAGITQGPLIETAALEKVKKHVADAISKGA
KLVTGGKPSVEGKNFYEPTILSNVNSQMLITYEETFGPIAPIIPFESDEEVIQLANSSQF
GLASYFYSRDIGRVWKVAEALEYGMVGVNTGLISNEVAPFGGIKQSGLGREGSVYGMDEY
LEMKYVCVGL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagtagatatacgtgcccaactaaaagattccagcttgtttaaagaagctgcc
ttcataaatggacaatggtttgactctaaaaatacctttgcagttaacaatcctgctact
gatgaagtcatagccaatgttgccaatcttgcaacaactgatgccgatctcgccatcacc
gccgcagaaaaagcactgccagcatggcgcagcaagctagcaaaagagcgtgcgctaatc
atgcgtaaatggtttgatctgattattgccaatacacaagatctcgccaccttaatgaca
ctggagcaaggcaagcctcttgctgaagcagcaggtgaagtagcctacggcgcttctttt
gtggaatggtttgctgaagaagcgaaacgagttgaaggctctattttgagcaccacctgg
ggcgataagcgcctaatggttctcaagcaaccgattggagtttgtgtagcaatcacgcct
tggaattttccgattgccatgattacccgcaaaattgcaccggccatggctgctggctgc
acgattgtgattaaacctgcagaacttacaccactctctgcattggcattggcagaacta
gcaaagcgtgctggagtacccgatggcgttatcaacatcatcacagctgatgccaatcaa
tcaattgccataggcaaaacactctgcgcatcccctatagtgcgccacctttcttttaca
ggctcgacagaagttggtcgcatcctcatggagcaatgcgctcctacagtaaagaaactg
gctcttgagttaggtgggcatgctccatttatcgtttttgatgatgctgatattgatgca
gccgttatcggcgctatggcctctaaatttagaaactcaggtcaaacctgcgtttgcgca
aatcgtttttacgttcataaaaaagtacaggatgcttttgtggaaaagtttgctaaagcc
cttgaaaccatcaaggtgggtaatggtatgcaagctgggattactcagggcccgctaatc
gagactgctgcacttgagaaagtaaaaaagcatgttgctgatgccattagcaaaggcgcc
aaactggtgaccggcggcaaaccatcggttgaaggtaaaaacttttacgagccaaccatc
ctatccaacgtaaatagccaaatgctcattacttacgaagaaacatttggccctatagca
ccaatcattccttttgaaagtgatgaagaagtcatccagctggcaaacagcagtcaattt
ggtcttgcttcttatttctatagccgtgatatcggtcgcgtctggaaagtagcagaggct
ttggagtacgggatggtcggagtaaacactggtctcatctccaatgaggttgcccccttt
ggcggcatcaagcaatcagggttaggccgcgaaggtagcgtttacggtatggatgaatat
ctcgaaatgaaatatgtctgtgtgggcttataa
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