Polynucleobacter yangtzensis: PKF023_02910
Help
Entry
PKF023_02910 CDS
T08788
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00260
Glycine, serine and threonine metabolism
pyt00460
Cyanoamino acid metabolism
pyt00630
Glyoxylate and dicarboxylate metabolism
pyt00670
One carbon pool by folate
pyt00680
Methane metabolism
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
pyt01230
Biosynthesis of amino acids
pyt01240
Biosynthesis of cofactors
pyt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKF023_02910 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
PKF023_02910 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PKF023_02910 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PKF023_02910 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PKF023_02910 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PKF023_02910 (glyA1)
Enzymes [BR:
pyt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PKF023_02910 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BDT76488
UniProt:
A0A9C7FJD7
LinkDB
All DBs
Position
282446..283690
Genome browser
AA seq
414 aa
AA seq
DB search
MFDRQNTLAKTDPQLWEAIQNENKRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRVKTLFGAEAANVQPHCGASANQAVFLAFLKPGDTFMGMS
LAEGGHLTHGMALNMSGKWFNPIAYGLDKNEEIDYEQMERLAREHKPKLIIAGASAYSKK
IDFERIGKLAKEVGAIFMVDMAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAVFPGLQGGPLMHVIAAKAVAFKEAAEPGFKEYQKQVVANAKALAETLI
ARGLRIVSGGTDSHVMLVDLRAKKMTGKEAERVLGEAHITCNKNGIPNDPEKPMVTSGIR
LGSPAMTTRGFKEAEARQVGNFIADVLDNPNDPENIAKVRAQVAELTKRFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgtcaaaacactttagctaaaaccgacccacagttatgggaagccattcag
aatgaaaataagcgtcaagaagaccatattgagctgattgcttctgaaaactacacctct
ccagcggtcatggcagcccaaggctcccaattgaccaacaagtacgctgaaggctatcca
ggtaagcgctattacggcggttgtgaattcgttgacgttgctgagcaactagctatcgat
cgtgtaaagactttatttggtgctgaagcagcaaacgttcagcctcattgcggagcatct
gctaaccaagcagtatttttggctttcttaaaaccgggcgatacctttatgggtatgagt
cttgctgaaggtggtcacttgactcacggcatggctttaaacatgagcggcaaatggttt
aatccaattgcttacggtcttgataaaaacgaagagattgattacgagcaaatggagcgc
ctcgctcgcgagcacaaaccaaaactgattattgctggtgcatctgcatactccaagaaa
attgattttgaacgcattggtaaattagcaaaagaagtaggcgcgatcttcatggttgac
atggctcactacgctggcttagtagctgcaggcgtctatccaaacccagtgccgcatgca
gatatcgttacctctacaactcataagagtttgcgcggtccgcgtggcggcattatcttg
atgaaagctgagcacgagaaagcgattaactccgcagtgtttccgggcttacagggcggt
cctttgatgcacgtgattgctgctaaagcggttgcatttaaagaggcagctgagccaggc
ttcaaagagtatcaaaagcaagttgttgcaaatgcgaaagcgcttgctgaaactttgatt
gctcgtggattacgcattgtttctggcggcacagattcacatgtgatgttggtggattta
cgtgccaagaaaatgactggtaaagaagctgagcgcgtattgggtgaggcgcatatcact
tgtaacaaaaacggtattccaaacgatccagaaaaaccaatggtgactagcggtattcgt
ttgggttcaccagcgatgaccactcgtggatttaaagaagctgaagccagacaagtaggc
aacttcattgctgatgttttggataatccaaatgacccagagaacattgctaaggtgcgc
gcacaagtagctgagttgaccaagcgcttcccggtttacggttaa
DBGET
integrated database retrieval system
