Polynucleobacter yangtzensis: PKF023_03640
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Entry
PKF023_03640 CDS
T08788
Symbol
wbpM
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00541
Biosynthesis of various nucleotide sugars
pyt00552
Teichoic acid biosynthesis
pyt01100
Metabolic pathways
pyt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PKF023_03640 (wbpM)
00552 Teichoic acid biosynthesis
PKF023_03640 (wbpM)
Enzymes [BR:
pyt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
PKF023_03640 (wbpM)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
adh_short
CoA_binding
PglD_N
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
BDT76561
UniProt:
A0A9C7FHK3
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All DBs
Position
358208..360100
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AA seq
630 aa
AA seq
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MFLDVFICGISVWLAFGLRLDQWGHFEVEQWLVFIVAIGFSFPLFISFGLYRAIFRYIGS
AALASMARAFILYSGLFFCLFTLIGVDDVPRSIGVIQPILLFIGIGTSRYFVRYWLGGIN
NVQKAFHKASPIALIYGAGSAGRQLAAGLNSNKEMLVKGFVDDDPRLQGSTINGIAVYPN
SGLRDLIYRLGITDVLLAIPSVSQGRRSEIISSLNGCGVRVRTLPGLIDLVAGRVRISDL
HDLDMNDLLGRAVVPPEVGLLEKNILDRVVLVTGAGGSIGSELCRQIIKFTPKSLILIDS
SEHSLYLIYEELKRALIELGFDRTSASENDQKFSAPQNLPIKIVPCLASVRDDDLLRKIF
RVHRPATVFHAAAYKHVPLVEQNPAEGIRNNVFGTFICAKASLECGVSQFILVSTDKAVR
PTNVMGASKRIAEMVLQAMAELAAKEGHATNFSMVRFGNVLGSSGSVAPLFSAQIAAGGP
ITLTHSEVTRYFMTIPEAAQLVIQASAMAVGGDVFVLDMGEPVRIHDLAVKMVYLSGLLV
KDEERPHGDIEIKVTGLRPGEKLYEELLIGDNPQPTAHPKIMKAHEEFLSWNPLQQELEK
LNLALESSDIRLIREMLKKLVPGYVPDGRV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcgatgtttttatttgtggaattagtgtttggctagcatttggacttcgcttg
gatcagtggggtcattttgaggttgaacaatggttagtttttattgtcgctattggattt
tcatttcccctctttatttctttcggcttataccgagctatttttaggtatattggttca
gctgcgcttgcctcaatggcgcgcgcttttattctttattcaggcttattcttttgtctt
tttacgctgattggggtggatgatgtgcctcgctcaatcggagtcattcaacccatttta
ttatttatcggaattggtacaagtcgctattttgtgcgttactggttggggggtattaac
aatgtacaaaaagcatttcataaggcttcgcctattgccttaatttatggggcaggctca
gcaggccgtcagctggcggcaggccttaatagcaacaaagaaatgttagtcaaaggcttt
gttgacgacgaccctcgcttgcagggaagtactattaacggaattgctgtctatccaaat
agtggcttgcgggatctgatttatcgactgggtattacggacgtattgcttgccattccc
tctgtgagccaaggtcgtagaagtgaaatcatttcatcattaaatgggtgcggcgttcgt
gtgcgtaccttgccaggactcattgatctggtcgctggtcgagtcagaatttctgatttg
catgatttggatatgaatgatctcctcggaagggcagttgtgccgcctgaagtcgggttg
ctggagaaaaatattctagatagagtggttttagtaactggggctggcggctcaattggt
agtgagctatgtcgccaaattattaaatttactcctaaatcattaattcttatcgatagc
agcgagcactctctttatttaatttatgaagaattaaaaagagcgcttattgaattaggt
tttgatcgtacgtcagcatccgaaaatgatcaaaaattttcagccccacagaatttgcca
ataaaaatagtgccatgccttgcttcggtacgcgacgatgatttattgcgtaaaattttt
agggtccatcgaccggccacagtatttcatgctgcagcatataagcatgttccgctggtc
gagcagaatcctgctgaaggaattcgtaataatgtttttggtacattcatatgtgcaaag
gcaagtttagagtgtggcgtttcgcaatttattttagttagcaccgataaggcggttagg
ccaaccaatgtcatgggggccagtaagcgcattgcagaaatggttttgcaggccatggcg
gagttggctgctaaggaagggcatgcaaccaatttttccatggtgcgatttggtaatgta
cttggctcatcaggatccgtagcaccactttttagtgcacaaattgctgcgggtgggccc
ataaccctgacgcattctgaggtaactagatatttcatgacaatacccgaagcggcgcag
ttggttatccaagctagtgcaatggctgtgggaggggacgtcttcgtattggatatgggt
gaacctgttcgaatccatgatttagcagtcaagatggtttatttgtctggcctactagtt
aaggacgaagaacgccctcatggcgatattgaaattaaggttacaggcttacgtccaggc
gaaaagctttatgaggagctcttgattggcgataacccacagccaacagctcaccctaaa
attatgaaggcgcatgaagaatttttatcttggaaccctttgcagcaagagcttgaaaag
ctgaacttggcattggagtcatctgatattagattgattagagaaatgctaaagaagttg
gtgcctgggtatgtcccagatggacgggtttga
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