Polynucleobacter yangtzensis: PKF023_04560
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Entry
PKF023_04560 CDS
T08788
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PKF023_04560 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_04560 (recO)
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PKF023_04560 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PKF023_04560 (recO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BDT76653
LinkDB
All DBs
Position
439762..440496
Genome browser
AA seq
244 aa
AA seq
DB search
MASIRVADEPAFVLHSIPYKETSLILDVFTRQYGRMALIAKGAKRPHSTLRPVLQRFQPL
LVSWSGKSELRTLTKSEWVGGMPSLVGDALLCGFYLNELLVKFLAREDDYEKLYDRYAET
INALSNLEFESKGLEEILRPFELSLLQETGYAAALDRCVETNEAPLAHEQYVYQPERGVR
PVQVDDPGHWPVLTGKSLLAIAVGDFSDSETLSESKQLMRFLLGLHLQDQVLTTRQILID
LKKI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgattcgagttgctgacgaacctgcttttgtattacacagcatcccttataaa
gagacgagcttaattctggatgtatttacacggcaatatggccgtatggccttaattgct
aaaggtgctaaacgtccgcattcaacactaagacctgtattgcagcgttttcagccattg
ctggtttcttggagtggtaaatccgagctgcgtaccttaacgaagtcagagtgggtaggt
ggcatgccctctttagttggagatgccttgctttgcggcttctacttgaacgagttgctt
gtgaagtttttagcgcgtgaagatgattacgaaaagctttatgaccgctatgcagaaacg
attaatgccttatcaaatttagagtttgagtccaagggcttagaagaaatcctacgtcct
tttgagttatcactcttgcaggagactggttatgccgcagcattagatcgctgcgttgaa
actaatgaggcacctttggctcatgagcagtatgtttaccagcctgagcgtggtgttcgt
cccgtccaggtcgatgatccggggcactggccagtcctgactggaaaatccttattggcg
attgctgttggtgatttttccgattcagagactctctctgaaagtaagcagttaatgcgt
tttctgttgggcttacatttgcaggatcaagtgctcactacgcgtcaaattttgattgat
ctgaagaaaatctag
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