Polynucleobacter yangtzensis: PKF023_05570
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Entry
PKF023_05570 CDS
T08788
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
pyt
Polynucleobacter yangtzensis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pyt03036
]
PKF023_05570 (smc)
Chromosome and associated proteins [BR:
pyt03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
PKF023_05570 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
Laminin_II
ABC_tran
Rad17
DUF4201
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BDT76754
UniProt:
A0A9C7CI55
LinkDB
All DBs
Position
544569..548090
Genome browser
AA seq
1173 aa
AA seq
DB search
MQLKSIKLSGFKSFVDPTHFEMPGQLIGVVGPNGCGKSNIIDAVRWVLGESRASELRGES
MQDVIFNGSGLRKPSGRASVELIFDNTEGRAQGQWSAFTELGIKRVLTRDGNSSYYVNNQ
VVRRKDIQDIFLGTGMGPRGYAIIGQGTINRILEAKPEELRVFLEEAAGVSKYKERRKET
ASRLEDTVENLTRVEDILRELDQQLTRLEKQATVAERHAELSTQMKSQQQLLWFVRQTEA
GKEQERHANGIRDTQVGLEEQTAKLRHVEAELETMRTQQYALQDKVSQAQGDLYQTNSDV
SQVESQILYVQEARQRLQQQTQDLQAQLKRWTVQETDAAQAQRTTEHELSLAAEKEQTLL
ADLNGLQEQMPSREEAYQNASRELNSARDALASIEQRLASLGERLRSMSAQSDELKGRET
RLVGEFDGLRRPDAEALQMAIDRQTMAARKVEEAKHRAVETQQRVPAADEARNAAQQKIQ
EANQDLAQTEAKLTALTALQASVQAQGKIGPWLESKGLKESKRLWQELKVESGWEAALES
VLRERLAAVTAKSVQETLALANDAPPSRLAILLTEEITPAHTSAPADFTPLLSRVQSAGA
ARLTSVLQEWLDNIYIASSLEDALHRREKLPAGGAFVTQQGHLVSRVGVQLYAADSEQAG
MLARAQEMESLEKQLRAQQLMQSELKGELDQCVANYQAAHQAAEQARENAEHAVQESHGF
EVERMQLTQAEEQYSQRAAQIQGELSELRQQMEQVSQTQEQSAAELLESEESKQGLQEAL
QVAQEKLERSTEERDRLRESLRAAEMAAQEAAFATRSLQQRIADLQRDQSTARTQIMEIQ
DKHDAAAQELETLSDEEAQDKLQGLLLARSAREAALANARTEQDALLHQLREADESRMQL
ERSLQPMRDKVVDLQLREQAARLNFEQFATLLSDAEADLTALEASFSPDLKVGALQSEVN
RLNTEIQSLGPVNMAALDELSSSRERKQFLDAQSADLNEAMQTLTDAIAKIDAETRDLLQ
GTFDQVNGHFGKLFPELFGGGHAELVMTGEEILDSGVQVMAQPPGKKNSSIYLLSGGEKA
LTAIALVFSLFLLNPAPFCLLDEVDAPLDDANTLRYANLVAKMSDKTQFLFISHNKITME
IAHQLIGVTMQEQGVSRIVAVDISSAVSMVEAA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactgaaatccatcaaactttccggctttaagtctttcgtagacccaacccatttt
gaaatgcctggccaattgattggcgttgttggtcctaacggttgcggaaagtcgaacatt
attgacgccgttcgctgggttttaggcgaatcccgcgctagcgaattgcgtggtgagtcc
atgcaagacgttatttttaatggttctggtttgcgtaaaccatctggtcgtgccagcgtc
gaactcatttttgataacaccgaagggcgcgctcaaggtcagtggagtgcctttacagaa
ttaggtatcaaacgtgttttaacgcgcgatggaaattcaagttattacgtcaataaccag
gtagttcgtcgtaaagatattcaggatattttcttgggcaccggtatgggtccaagaggt
tacgcgatcattggtcaaggcacaatcaacagaattttagaggcgaagccagaagagttg
cgtgtgttcttggaagaggctgctggcgtttctaaatataaagagcgtcgcaaagaaacc
gcatcccgtttagaagacactgtagaaaatttaactcgcgtcgaagatatcttgcgcgag
ctcgatcaacaactcactcgtttggaaaaacaagcgactgttgctgagcgtcacgccgag
ctttctacacagatgaaatcacagcagcagctgttgtggtttgtgcgtcagaccgaggct
ggtaaagagcaggagcgtcatgccaacggtatccgcgatacgcaagttggcctagaagaa
cagaccgccaagctacgccacgtcgaagctgagctagagacaatgcgtacacaacagtac
gcattacaagacaaagtttctcaagcacaaggcgatttgtatcaaaccaattctgacgtg
agtcaggttgagtcacagattctttatgtacaagaagcacgtcaacgcttgcaacagcaa
actcaagatttgcaggcgcaattaaagcgttggactgtgcaagagactgatgcagcgcaa
gctcagcgcactactgagcatgagctttctttagctgctgaaaaagagcaaacactcttg
gcagatttaaatggcttgcaagagcaaatgccaagtcgtgaagaggcttatcaaaatgcc
tcacgcgagctaaatagtgcacgtgatgcattagcttcaattgagcaacgcttggcaagt
ttgggcgaacgacttcgctctatgtctgctcagtcagatgaattgaaagggcgcgaaact
cgccttgttggtgaattcgatggcctacgtcgtccagatgctgaagctttacagatggca
attgatcgtcaaacaatggctgctcgcaaagtggaagaagccaagcatcgcgctgttgaa
actcagcaacgcgtacctgctgctgatgaagcgcgtaacgctgcccagcaaaaaattcag
gaagcaaatcaggatttagctcaaacggaagctaaattaacagcattaactgctttgcag
gctagcgttcaggcgcaaggcaagattggaccttggctggaaagcaagggcctcaaagaa
agcaagcgtctttggcaagagctcaaagttgagagtggctgggaagctgcacttgagtca
gtattgcgtgagcgtttggctgcggttactgcaaagagcgtccaagaaacattggctttg
gccaatgatgcgcctccaagtcgcttggcgattttgctcacggaagaaattaccccggcg
catacatccgcccctgctgacttcacgccgttgttgagccgagtgcaaagcgcaggcgca
gcaagactcacttctgtattgcaagagtggttggacaatatttacattgccagcagcctc
gaagatgctttgcatcgtcgcgaaaaattacctgctggtggcgcatttgttactcaacaa
ggccatttggtaagtcgtgttggtgtgcaactttatgcggcagactctgaacaagctggt
atgttggctcgtgctcaagagatggaaagtctcgagaaacaattacgtgcgcaacagttg
atgcaaagcgaactcaaaggcgaattggatcagtgtgtagcgaactatcaggcggcccat
caagcggctgagcaagctcgtgaaaatgcggaacatgctgtccaagaatcgcatggcttt
gaagtagaaagaatgcagttgacccaagctgaagaacagtacagtcaacgtgcggcgcag
attcagggtgagttaagtgaattgcgtcagcagatggagcaagtgagccagactcaagag
cagtctgctgccgaattgctcgagtcagaagagtccaagcaaggcttgcaagaggcttta
caagtagctcaagaaaaattagagcgctctactgaagagcgtgatcgtttgcgtgaatcg
ctccgtgctgctgaaatggctgcacaagaggcggcatttgctactcgttcattgcagcag
cgtatagccgacttgcaacgtgatcaaagtactgcgcgtacacagatcatggagattcaa
gataagcatgatgcagccgctcaagagttagaaacattgagtgatgaagaagcgcaagat
aaattacagggcttattgctagcacgcagcgcacgcgaggcagctttggcaaatgctcgt
actgagcaagatgctttattgcatcaactgcgtgaagctgatgagtctcgcatgcaatta
gagcgtagcctgcaacctatgcgtgacaaggttgttgatttgcaattgcgtgaacaggct
gcacgtttgaactttgagcaatttgctactttattatcggatgctgaggctgacctcact
gcgcttgaagcaagcttcagccctgatctgaaggttggcgcattgcagagtgaagtgaat
cgcttgaatactgaaattcaatctctaggcccagtcaatatggctgcgctagatgaatta
tccagttcccgtgagcgtaagcagttcttggatgctcaatctgctgacttgaatgaagcg
atgcagaccttgacagatgcgattgccaagatcgatgcagagacccgtgatttattgcaa
ggcaccttcgatcaggttaatggccactttggaaagctattccccgaattgttcggtggc
ggtcatgcagagctggtgatgacaggtgaagagatcttggattccggtgttcaggtgatg
gcgcagcctcctggcaagaaaaacagctccatttacctgctctctggtggtgaaaaggct
ttgactgcaattgccttagtgttctcactcttccttttgaatccagctccattttgtttg
ctggatgaggttgatgcaccattggatgatgcaaataccttgcgttatgcaaatctagtt
gccaaaatgtcagataagacacagtttttatttatctcacataacaagatcactatggaa
atcgctcatcaattgattggtgtcacgatgcaagagcagggcgtatcccgcattgttgct
gtggatatctcttctgcggtatcaatggtagaggctgcctaa
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integrated database retrieval system
