Polynucleobacter yangtzensis: PKF023_07740
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Entry
PKF023_07740 CDS
T08788
Symbol
lpd
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00010
Glycolysis / Gluconeogenesis
pyt00020
Citrate cycle (TCA cycle)
pyt00260
Glycine, serine and threonine metabolism
pyt00280
Valine, leucine and isoleucine degradation
pyt00310
Lysine degradation
pyt00380
Tryptophan metabolism
pyt00620
Pyruvate metabolism
pyt00630
Glyoxylate and dicarboxylate metabolism
pyt00640
Propanoate metabolism
pyt00670
One carbon pool by folate
pyt00785
Lipoic acid metabolism
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
pyt01210
2-Oxocarboxylic acid metabolism
pyt01240
Biosynthesis of cofactors
Module
pyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pyt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PKF023_07740 (lpd)
00020 Citrate cycle (TCA cycle)
PKF023_07740 (lpd)
00620 Pyruvate metabolism
PKF023_07740 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
PKF023_07740 (lpd)
00640 Propanoate metabolism
PKF023_07740 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PKF023_07740 (lpd)
00280 Valine, leucine and isoleucine degradation
PKF023_07740 (lpd)
00310 Lysine degradation
PKF023_07740 (lpd)
00380 Tryptophan metabolism
PKF023_07740 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PKF023_07740 (lpd)
00670 One carbon pool by folate
PKF023_07740 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyt04147
]
PKF023_07740 (lpd)
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PKF023_07740 (lpd)
Exosome [BR:
pyt04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PKF023_07740 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
GIDA
Biotin_lipoyl_2
FAD_binding_2
GCV_H
NAD_binding_8
3HCDH_N
Thi4
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BDT76971
UniProt:
A0A9C7CA31
LinkDB
All DBs
Position
771965..773749
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AA seq
594 aa
AA seq
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MAKQTILVPDIGDYSDVPVIEVLVKVGDVIEKEQPLLVLESDKATMEVPADAAGTITSIA
VKLGDKVGKGSVIAEIEASGAAPAAKPAAAPVAPAPAAPTMTAAPAPVAGQYSGKVDHEC
EVLVLGAGPGGYSAAFRSADLGMNTVLVERYPTLGGVCLNVGCIPSKALLHTTSVMDEVK
TMAKHGITFGAPKIEIDQLRGYKESVIAKLTGGLAGMAKARKVKVVRGLGKFLDANHVEV
ELTDGTGQDLTGKKEVVRFQKAIIAAGSQPVKLPFLPEDPRIVDSTGALLLKSIPKRMLV
IGGGIIGLEMATVYSTLGSRIDIAEMMDGLMAGADRDLEKVWEKFNAGRFEKIMLKTRAA
RAEVKPDGIQVSFEGENAPAESQTYDLVLVAVGRTPNGKKIDAGKAGVQVDERGFIPVDK
QMRTNVSNIFAIGDLVGQPMLAHKAVHEGHVAAEAAAGEKSYFDAKQIPSVAYTDPEVAW
AGLTEEQCKAQGIAYEKGLFPWAASGRAIANGRDEGFTKLIFDATTHRIIGGGIVGTHAG
DLIGEVCLAIEMGADAVDIGKTIHPHPTLGESVGLAAEAAHGHCTDLPPVKKKS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaaacaattctcgttccagatattggtgactattcagatgtacctgttatt
gaagtgctagtaaaagtcggcgacgttattgaaaaagaacaaccgctcttggtgctcgaa
tcagacaaagcgacaatggaagtgccggcagatgctgcaggcactatcactagcattgca
gttaagttgggcgataaggttggcaaaggttctgtgattgcagaaatcgaagcaagtggt
gcggcgcctgccgctaaacctgctgcagctcctgtggcaccagctccggctgctccaaca
atgacagccgcacctgcaccagtagcagggcagtacagcggcaaggttgatcatgaatgt
gaggtgttagtacttggtgctggccctggcggttacagcgcagcattccgaagtgctgac
ttgggtatgaataccgttttagtagagcgttacccaactttgggtggcgtttgcttgaat
gtcggttgtattccatctaaagcattgctccacaccacttcagtgatggatgaagtaaag
accatggcaaagcatggcattacctttggtgcgccgaagatcgagattgatcaattacgt
ggttacaaagaatccgtcattgccaaattaactggtggtcttgctggaatggcaaaggct
cgtaaagtgaaggtagtgcgcggcctgggtaagttcttagatgcgaaccatgtcgaggtt
gagttaaccgacggtactggccaagacctcacgggtaaaaaagaagtggtgcgctttcag
aaggccatcattgctgccggtagtcagccagtgaagttgcctttcttaccagaagatcca
cgtattgtggacagtacgggcgcattattgctcaagagtattccaaagcgtatgttggta
atcggtggcggcattattggtctagagatggcgactgtttacagtacgctgggctcacgt
attgatattgccgagatgatggacggcctcatggcaggtgcagatcgtgatttggaaaag
gtctgggagaagttcaatgccggacgttttgaaaaaatcatgctcaagactcgcgctgct
agagcagaagtgaagcctgatggcatacaggttagcttcgagggcgagaatgcgccagcg
gaatcgcaaacctacgacttggtattagttgcggtaggccgcactccaaatggcaagaag
attgatgctggtaaagcaggcgtgcaggtagatgagcgcggctttattccagtggataag
caaatgcgcactaatgtctccaatatttttgcaattggtgacttggttggtcagccgatg
ttggctcataaggcggtgcatgaaggtcacgttgctgctgaggctgctgctggtgaaaaa
tcttactttgatgcgaagcaaattccatcggttgcttataccgatcctgaagtggcttgg
gctggcttgactgaagagcagtgcaaagcacaaggcattgcctatgaaaaaggtttattc
ccatgggcagctagcggacgagcaattgccaatggacgtgatgaaggtttcacaaaactc
atttttgatgcaactactcatcgcattattggtggcggtattgttggtacacacgctggt
gatttgattggtgaagtgtgtctagccattgagatgggcgctgatgcggtggatattggt
aaaactattcatccacatccaaccctcggtgaatctgtaggtcttgcggctgaggcggcc
catggccattgcactgatttaccacccgtgaaaaagaaatcctaa
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