Polynucleobacter yangtzensis: PKF023_07980
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Entry
PKF023_07980 CDS
T08788
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00020
Citrate cycle (TCA cycle)
pyt00190
Oxidative phosphorylation
pyt00650
Butanoate metabolism
pyt00720
Other carbon fixation pathways
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
Module
pyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pyt_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PKF023_07980 (sdhA)
00650 Butanoate metabolism
PKF023_07980 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PKF023_07980 (sdhA)
00720 Other carbon fixation pathways
PKF023_07980 (sdhA)
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PKF023_07980 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_binding_3
Thi4
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BDT76995
UniProt:
A0A9C7FA68
LinkDB
All DBs
Position
793792..795570
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AA seq
592 aa
AA seq
DB search
MTAIKKSLPRRRFDAVIIGAGGSGMRASLQLAEAGLNVAVLTKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDVIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQRNVRAKTNFFVEWLALDLIRDDDG
DVVGVTALEMETGQVYILEAKVVMLATGGAGRIWDASTNAFINTGDGMGLAARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGGILRNKDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVVLDLTHIGADTIMKRLPSVYEIGINFANVDVTKEPIPVVPTIHYQ
MGGIPTNINGQVVVPANGIHNEIVNGLYAIGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVGLDLKNREFKPLPANAGQQTLERIAKLDNSTSGEYAQDVANDIRKCMQKYAGVFRN
QELMDEGVRQMAKLTERAKHLWVKDKSEIFNTARIEALEVANLVETANATMISAAARKES
RGAHSHDDHPHRDDENWMKHTLWYSEGNKLTYKPVILKPLTVESFPPKERTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaattaaaaaatcattgccacgccgccgttttgatgcggtgattattggagca
ggtggttcaggtatgcgcgcttcattgcagttggctgaagccggcttgaatgttgctgtt
ctgacaaaggttttcccaacacgttcacacacagttgctgcacaaggtggtatcggtgct
tcattgggcaacatgagtgaagacaattggcactatcacttttacgacaccatcaaaggt
tccgactggttaggcgaccaggacgtgatcgagtttatgtgtcgtgaagctccaaaagtt
gtttatgagttagagcactttggtatgccgtttgaccgtaacccagatggcacgatttat
cagcgtccattcggtggtcacacagcaaactatggcgagaagccagtgcagcgcgcatgt
gctgcagctgaccgtactggtcatgcaatgttacacactttgtatcagcgtaacgtccgc
gcaaaaaccaacttcttcgttgaatggttggcactcgatttgattcgtgatgacgacggt
gatgttgttggtgtaactgctctcgaaatggaaactggccaggtttatattctggaagcc
aaggttgtgatgttggctactggtggtgcgggtcgtatctgggacgcatcaactaacgca
tttattaataccggtgacggtatgggcttggctgctcgcgcaggcattcctttggaagac
atggagttctggcaattccacccaactggcgtagctggtgcgggcgtattgctgacagaa
ggctgccgcggtgaaggcggtatcttgcgtaacaaagatggtgagcgtttcatggagcgt
tatgcgccaactttgaaagatttggctccacgcgatttcgtatcacgctcaatggaccaa
gaaattaaagaagggcgcggttgcggtcctaatggtgattatgttgtgctcgatttgacg
cacattggtgccgatacgatcatgaagcgtttgccttctgtttatgaaattggtatcaac
tttgctaacgttgacgttactaaagagccaattccagttgtgccaacaattcactatcag
atgggcggtattcctaccaacatcaatggtcaagtagttgtgcctgcaaatggtattcac
aatgaaatcgtgaacggcttgtatgcgattggtgagtgttcatgcgtttctgtgcacggt
gcgaaccgcttgggtacaaactcattgctcgacctcttagtattcggtcgtgctgctggt
aaccacattgttggccttgatctcaagaatcgcgaattcaagccattgcctgcaaatgct
ggtcagcaaacattggagcgtattgcgaagttggataattcaacttcaggcgagtacgca
caagacgttgcaaacgatattcgcaagtgcatgcagaaatatgctggtgtattccgcaat
caagagttgatggacgaaggtgttcgtcaaatggctaaattgactgagcgtgccaagcac
ttatgggttaaagacaaatccgaaattttcaatacagcacgtattgaagctttggaagtg
gctaacttggttgaaactgcaaacgcaaccatgatttctgcggcagctcgtaaagagagt
cgtggcgctcattcacatgatgatcatccgcatcgtgatgatgagaactggatgaagcat
accctttggtacagcgagggcaataagcttacttacaaaccagttattttgaagccttta
actgttgaatcattccctccaaaagaacgtactttctaa
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