Polynucleobacter yangtzensis: PKF023_09150
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Entry
PKF023_09150 CDS
T08788
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00061
Fatty acid biosynthesis
pyt00071
Fatty acid degradation
pyt01100
Metabolic pathways
pyt01212
Fatty acid metabolism
pyt02024
Quorum sensing
pyt04146
Peroxisome
Module
pyt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PKF023_09150 (fadD)
00071 Fatty acid degradation
PKF023_09150 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PKF023_09150 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKF023_09150 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pyt01004
]
PKF023_09150 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyt04147
]
PKF023_09150 (fadD)
Enzymes [BR:
pyt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PKF023_09150 (fadD)
Lipid biosynthesis proteins [BR:
pyt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PKF023_09150 (fadD)
Exosome [BR:
pyt04147
]
Exosomal proteins
Exosomal proteins of breast milk
PKF023_09150 (fadD)
Exosomal proteins of breast cancer cells
PKF023_09150 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BDT77112
UniProt:
A0A9C7CY69
LinkDB
All DBs
Position
902605..904281
Genome browser
AA seq
558 aa
AA seq
DB search
MVNPSKPWLKNYPEGVPHDVDISAYSSLLQMFDEAFERFPNRRACEYLGKYLTYSELDQH
SRHFAAYLQNIGLEPGARIAIMLPNVMQYQIAMLGVLRAGFVVVNVNPLYTARELEHQLK
DSGATALIVLENFAHVYQQIASSAPLKKVVVTSMGEMIGIKGAIVNFVVRNVKKLVPAWH
IPGHTLFTQALSEGGRQQWKKPNTTLDDIAFLQYTGGTTGLSKGAILLHRNILSNVLQTD
LWLEPGLKRKPVDQLVFLCALPLYHIFALTACALMGMRKGGLLILVPNPRDFDGFIKLLK
KHPDINIFPGVNTLFNALMHKPEFASVKFPNILATIGGGMAMQKVVADQWQKMTGAPIAE
GYGLSETSPVACVNSPLIESFTGYIGLPVSGTEVRILDDAGNEVPFGNPGEICIRGPQVM
AGYWNKPEETKNVMTADGFFRSGDIGIMNADGYTKIVDRKKDMVLVSGFNVYPNEVEEVL
SLIPGVLECAVIGVPDEDSGEAVKAFIVKQDPDLTEEAILAYCKENLTNYKRPKHIVFRN
DLPKTNVGKILRRELRDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggttaatccctcaaaaccttggttaaaaaactatccagaaggtgtacctcatgatgtc
gacatctctgcttattcatcattgctgcaaatgtttgatgaagcctttgagcgctttcca
aatcgccgagcatgtgagtatctaggtaagtatttaacttacagtgagcttgatcagcac
tccagacattttgccgcctatttgcagaatattggattagaacccggcgctcgtattgcc
atcatgctgcctaatgtgatgcaatatcagatagcgatgctgggtgtactaagagctgga
tttgtggtggtcaatgtcaatccactatatacggctcgcgaactggagcatcaactcaaa
gatagcggcgcaactgctcttattgttcttgaaaactttgctcatgtttatcaacaaatt
gcctcaagcgcaccactaaagaaggttgttgttacttcgatgggtgagatgattggcatc
aagggtgcaatcgttaactttgtcgttcgcaatgttaaaaagttggtccctgcttggcat
atacctggtcatactctctttacacaggctttgagtgagggcggtcgccagcaatggaaa
aagcccaacactacgctcgacgatattgccttcttgcaatatacgggaggtacaaccggc
ttatcaaaaggcgcgattctgctgcatagaaatattttgtcaaatgtgctgcagacggac
ttatggttagagccaggattaaagagaaaacctgttgatcaattggtcttcttatgtgct
ttaccgctttatcacatctttgctttaacagcatgtgcgcttatgggaatgcgcaagggc
ggccttttaattttggtgcctaatccacgtgactttgatggctttattaagttgctgaaa
aagcatcctgatatcaatattttcccgggcgtcaatacattatttaatgctctgatgcat
aaaccagaatttgcttcagtcaagttccctaatattttggcaaccatcggtggcggcatg
gcaatgcaaaaggtagttgccgatcaatggcagaaaatgactggcgcgcctattgccgag
ggttacgggttatcagaaacctctccagtagcctgcgttaattcaccattgattgaaagt
tttacaggttatataggtttacctgtttctggaactgaagtgcgtattttggatgatgca
ggaaatgaagtgcctttcggtaatcctggcgaaatttgtattcgtggtccacaagtgatg
gccggctattggaataagcccgaagaaacgaagaatgtgatgactgctgatggattcttt
aggtccggtgacattggaatcatgaatgccgatggatatactaagatcgttgatcgtaaa
aaggatatggtgctggtatccggttttaatgtctacccaaatgaagtggaagaagtgcta
tctctcatcccgggcgttttggaatgtgcagtcattggtgtgccagacgaagattctggt
gaggcagtaaaggcatttatcgttaagcaggacccggatttaacagaggaggctatcttg
gcgtactgcaaagaaaacctcaccaactataagcgtcctaagcacattgtcttccgtaac
gatttgccaaagaccaatgttggaaaaattttaagacgtgagctcagggatctatga
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