Polynucleobacter yangtzensis: PKF023_10990
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Entry
PKF023_10990 CDS
T08788
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00630
Glyoxylate and dicarboxylate metabolism
pyt00680
Methane metabolism
pyt01100
Metabolic pathways
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKF023_10990
09102 Energy metabolism
00680 Methane metabolism
PKF023_10990
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PKF023_10990
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer2
Fer4_9
Fer4_10
Fer4_21
Fer4_8
Fer4_6
Fer4
Fer4_22
Fer4_17
Fer4_4
Fer4_2
Fer4_16
GDC-P
Fer4_18
SH3_2
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
BDT77296
UniProt:
A0A9C7FI94
LinkDB
All DBs
Position
complement(1106665..1109559)
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AA seq
964 aa
AA seq
DB search
MNAPTNPKELELQTVEFKLDGKTIVSYEGETILKAAKRHGIDIPHLCFKDGYRPDGNCRA
CVVEINGERTLAPSCCRSATPGMEVKANSERAVKSQKLVLEMLLSDMPDEGFKWVGDTKE
EEQKNQHGELSTWAARMDVTVRPELKAIRRAKVSSDVSHPAMAVNLDACIQCNRCVRACR
EEQVNDVIGYAMRGAHSEIVFDLNDPMGDSTCVACGECVQACPTGALMPKGLIGSQTVDR
KVDSVCPFCGVGCQITYNVKDEKIVSVEGRDGPANHNRLCVKGRFGMDYIHNPQRLTKPL
IRKAGVPKDESILDGKQDWSDIFREATWEEALEFAAGGLKKLKDQHGLKVLAGFGSAKGS
NEEAYLFQKLVRTGFGSNNVDHCTRLCHASSVAALLEGVGSGAVSNQVNDVEHSSMIFLI
GSNPTANHPVAATWFKNAAKRGAKIVLCDPRATDISKYAWRMMQFKPDTDVAMLNAMIYT
IIEEGLVDKDFVENRANNFAALKENIKGYSPEAMAPICGIPAETLREVAREFATTKSAMI
LWGMGVSQHVHGTDNARCLIALVSITGQIGKPGSGLHPLRGQNNVQGASDAGLIPMMFPN
YQRVDNPEAHAWFEKFWDTPLDKKPGYTVVEIMHKITAPDSDPDKIRGMYVEGENPAMSD
PDLNHARHALASLEHLVVQDIFMTETALLADVVLPASAWPEKVGTASNTDRMVQMGKKAI
NPPGDAKPDLWIIQEIAKRMGLNWNYQGPDAGVAAVYDEMRQAMHGAIKGITWERLEKES
SVTYPCLSAEDPGRPIVFDDEFATADGKVKLVPADIIPANERPDDEYPFVLITGRQLEHW
HTGSMTRRATVLDAIEPMATVSMNGEDMTQLGVSAGDVITVQSRRGEVGIHVRRDDGTPK
GVIFIPFAYYEAAANLITNPALDPFGKIPEFKYCAVKLAKGGQASTLIGYGTNAPGGSKE
MSNV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacccacaaatcctaaagaacttgaattgcaaaccgtagagttcaagctagac
ggcaagacgattgtttcctatgaaggtgaaacgattctcaaagctgccaaacgccacggt
attgatattccacatctatgcttcaaagatggctatcgcccagatggcaattgccgtgct
tgcgtagtggaaatcaatggtgaacgcactctggcgccaagttgctgcagaagcgcaacc
cctggcatggaagtcaaagccaatagcgaacgtgccgtgaagagtcaaaagcttgtttta
gagatgttgctctccgatatgcctgatgagggttttaagtgggtgggcgataccaaggaa
gaagagcaaaagaaccagcatggcgagctcagcacttgggctgcacgcatggacgttacc
gttcgcccagaactcaaagcaattcgccgtgcaaaagtcagcagcgatgtttctcatccg
gcgatggctgtcaatctagatgcttgtatccaatgtaatcgctgtgtacgtgcgtgtcgt
gaagagcaggtcaatgatgtgattggttacgccatgcgtggcgctcatagtgaaatcgtc
tttgacttgaacgatccaatgggcgacagtacttgcgttgcttgcggcgagtgtgtacaa
gcctgtccaactggcgcattgatgcctaaaggtttaatcggttcgcaaacagtcgaccgc
aaggtagattcagtatgcccattctgtggtgtaggttgtcaaatcacttataacgttaaa
gatgaaaaaattgttagcgtagaaggtcgtgatggcccagccaaccacaatcgcctttgc
gttaaaggccgctttggtatggactacatccataatccacagcgcctgactaagccactt
attcgtaaagcaggcgttcctaaggatgagtccatcctagatggcaagcaagactggtca
gatatcttccgtgaagcaacctgggaagaggctctggaatttgcagctggcggcctcaag
aaactcaaggatcagcacggcttaaaagtgttagcaggttttggttccgcaaaaggtagt
aatgaagaggcatacttattccaaaaactagtacgcactggttttggtagcaataacgta
gatcattgcacacgtctatgccacgcatcatctgttgccgcgctcctagagggcgtaggc
tcaggtgctgtaagtaatcaggtgaatgatgttgagcattccagcatgattttcttgatt
ggctctaatccaacagcaaatcacccagtggcggctacttggtttaagaacgcagctaaa
cgtggcgcaaaaattgttttgtgcgatccacgtgcaacagatatcagcaagtatgcatgg
cgaatgatgcagttcaagccggatactgatgtggcgatgctcaatgccatgatctatacg
atcattgaagaaggcttagtagataaagactttgttgaaaatcgggctaataattttgca
gctctaaaagaaaatatcaaaggctatagcccagaggcgatggcaccgatctgcggtatt
ccagcagagacgctgcgagaggttgctcgtgagtttgcgactaccaagtcagctatgatt
ttgtggggcatgggcgtcagtcagcacgttcacggtacagataatgcacgctgcctaatt
gctttggtgagtatcactggtcaaattggtaagccaggctcaggattgcacccattgcgc
ggtcagaacaatgtgcagggcgcaagtgatgctggtttgattccgatgatgttcccgaac
tatcaacgtgtggacaatccagaagcacatgcttggtttgaaaagttctgggatacgccg
cttgataaaaagccagggtacacagtggtagagatcatgcataagatcactgcgcccgat
tctgatccggacaagattcgtggcatgtatgtcgaaggcgagaaccctgcgatgagtgat
ccagacttaaatcatgcacgtcatgcattggcatctttagagcatttggtcgtacaagac
atcttcatgacagaaacagcgctgttagcggatgtggttctgcctgcgagtgcttggcct
gagaaggtaggtacggctagcaatactgaccgtatggtgcagatgggcaagaaagccatt
aatcctcctggcgatgcaaagcctgacttatggattattcaggaaattgctaaacgcatg
ggtctcaattggaattaccaaggtcctgatgctggcgttgctgctgtttatgacgaaatg
cgtcaagcgatgcatggcgccatcaaaggcattacttgggagcgcctagaaaaagaatct
agcgtcacttatccatgcttatctgccgaagatccgggccgtccaattgtgtttgatgat
gaatttgccacagcagacggcaaggtgaagttagttccagcagacatcattccagcaaat
gaacgtcctgatgatgagtatccatttgtattaattacaggtcgtcagttagagcactgg
catacgggcagtatgacgcgtcgtgctaccgtgttagatgccattgagcctatggctacc
gtatctatgaatggtgaagatatgactcagttgggagtatctgctggcgatgtgatcact
gtgcagtctcgtcgtggtgaggtaggaattcacgttcgaagagatgacggtacgccaaaa
ggcgtgatcttcattccgtttgcttactacgaagctgctgcaaacttaattaccaatcct
gccttagatccatttggcaagattccagagtttaagtattgcgcagtgaaattggcaaaa
ggcggtcaggcttctacattgataggatatggcaccaatgccccaggtggatctaaggaa
atgtctaacgtttaa
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