Polynucleobacter yangtzensis: PKF023_11000
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Entry
PKF023_11000 CDS
T08788
Name
(GenBank) NADH-quinone oxidoreductase subunit F
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00630
Glyoxylate and dicarboxylate metabolism
pyt00680
Methane metabolism
pyt01100
Metabolic pathways
pyt01120
Microbial metabolism in diverse environments
pyt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKF023_11000
09102 Energy metabolism
00680 Methane metabolism
PKF023_11000
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PKF023_11000
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Paralog
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Motif
Pfam:
Complex1_51K
2Fe-2S_thioredx
NADH_4Fe-4S
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
BDT77297
UniProt:
A0A9C7D040
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Position
complement(1109600..1111402)
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AA seq
600 aa
AA seq
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MNHPKPSGEVKAVAVATADDLRETIRRKSKLKGRQADDASVAEVRKLIGEAPHRRDLLIE
NLHKLNDEYRALHDHHLVALAKEMNLPMAEVYEVATFYHHFEVVRGNDPVADITIRVCDG
IACELAGAQNLLAKLPGILGNSSIKVIAAPCVGRCEQAPVAVVHQYPVLFATTEKVSAAV
KNKLTTQPMAKDDAVFEPAALAEQGVSPQGEMQALSPDYVGYESYRAQGGYSLAKEIHEG
KKDAESIIKAMENSGLRGLGGAGFPAGRKWRIVKDQVAPKLMAVNIDEGEPGTFKDRTYL
ERDPHRFLEGLLIAANVVGIDACYIYLRDEYHGCRELLEAELAKLKANPPFKLPTIELRR
GAGAYICGEESAMIESIEGKRGEPRMRPPYIAQVGLFGRPTLEHNFETLYWVRDIVQRGP
EWFSSFGRHDRKGLRSFSVSGRVKKPGVKLAPAGITIQELIDEYCGGMQDGHKFYGYLPG
GASGGILPATMNDIPLDFDTLQPYGCFIGSAAVMVFSDKDKARDMALNVMHFFEHESCGQ
CTPCRVGTSKAAQLMQAKSWDQETLEDLATVMVDASICGLGQAAPNPIRCIHKYFPEEVA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatccaaagccttctggagaagtcaaagcggttgctgttgcaacggcagatgat
ttgagggaaaccattcgtcgcaagagcaagttgaagggtcgtcaagctgatgatgcttct
gttgcagaagtgcgcaagctgattggagaggctccacatcgtcgtgacttgctcattgaa
aatcttcacaagctcaacgatgagtatcgcgctttgcatgatcatcatttagttgcctta
gcaaaagaaatgaatttgccaatggcagaggtatacgaagttgctactttctatcaccac
tttgaagttgtgcgcggtaacgatccagtagcagacatcacgattcgtgtttgtgatggc
atcgcctgtgaattagctggcgcgcaaaatctattagctaaattgccaggcatcttgggt
aactccagtattaaagtcattgcagctccatgtgttgggcgttgcgagcaggcgcctgta
gcagtggtacaccaatacccagtcctatttgctacaaccgagaaagtttctgctgccgta
aaaaataagttgaccacacagccgatggctaaagatgatgctgtatttgagcctgctgct
ttagcggagcagggtgtttcaccacaaggtgaaatgcaagccctttctcctgactatgtt
ggttatgagtcttatcgtgcgcaaggtggttattcacttgctaaagaaatccacgaaggc
aagaaagatgctgagagcatcatcaaggccatggaaaattctggattgcgcggattgggt
ggcgcaggatttccggcgggacgaaaatggcgcattgtgaaagaccaagttgctcctaag
ttgatggctgtgaatattgacgaaggcgagccaggaacatttaaagaccgtacatactta
gagcgtgaccctcatcgcttcctagagggcttgttgattgctgccaatgttgtgggtatc
gatgcttgctatatctatttgcgcgatgaataccatggctgcagagagttactagaggct
gagttagcaaaactcaaagccaatcccccattcaaattacctacgattgaattgcgtcgt
ggtgccggtgcttacatctgcggtgaagagtccgccatgattgaaagtattgagggcaag
cgtggtgagccgcgtatgcgtcctccatatatcgcacaagtaggtttgtttggtagacca
acgctcgagcacaactttgaaaccttgtactgggtgcgcgacattgttcagcgtggccca
gagtggtttagttctttcggtcgtcatgatcgtaaaggcttgcgtagttttagtgtgagt
ggtcgcgtgaagaagcctggtgtgaagttggctcctgccggtatcaccattcaagaattg
attgatgagtactgtggtggcatgcaagatggccacaagttctacggctatttacctggt
ggtgcatcaggcggtattttgccggctactatgaatgacatcccactcgactttgatacc
ttgcaaccttatggctgctttattggttctgctgcagtgatggtgtttagtgataaagac
aaagcgcgtgatatggcgctcaacgtcatgcacttctttgagcatgagagttgcggtcaa
tgcactccttgccgcgtaggcacaagcaaagcagctcaattaatgcaagccaagtcttgg
gatcaggaaactttagaagacttagccacagtaatggtggatgcttctatttgtggttta
ggacaagcagcaccaaaccccattcgttgtattcataaatatttcccagaagaagtagct
taa
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