Polynucleobacter yangtzensis: PKF023_11470
Help
Entry
PKF023_11470 CDS
T08788
Name
(GenBank) hypothetical protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PKF023_11470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pyt02000
]
PKF023_11470
02044 Secretion system [BR:
pyt02044
]
PKF023_11470
Transporters [BR:
pyt02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PKF023_11470
Secretion system [BR:
pyt02044
]
Type I secretion system
Adhesin protein transporter
PKF023_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_29
SMC_N
AAA_16
AAA_21
AAA_22
AAA_23
T2SSE
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BDT77344
UniProt:
A0A9C7CVV1
LinkDB
All DBs
Position
complement(1196886..1201163)
Genome browser
AA seq
1425 aa
AA seq
DB search
MKNFLQKIWSVLQYCGRSLKLGAITLFVAVKSDLLHLVGQLSSKSKTISKSKAFNKQQAQ
DLLSANLLKTKPSHWLPHLRAHWQAAIKTIRFEWQEFKVEISILLERIHQIRNQTKEQKL
VGMLSAFDTERKTILAASIVINILALAFPLLMLQLYDRILPHQSLDTLGLFAITVGIAVA
LESITRVARSYTTAWISARFEHKAMMEVAERVLVEPLHAFERQGTGAVMENFKSISSLKY
HYSGQTFQQLMDLPFTLLYVLIIFILNIWIGLVVTFGYAVFVYITWKMGRNDPELIKEQK
AADLRRSNFLNETLGNIHTMKSMSMEALMLRRYERLQESGARIMARMTYASDMSSGVGNI
FSPLMTTIIVALGAYLVITHHLTNGELAACILLGMRSLAPLQRLGGMWTKFQQDEVLRDG
LAKTLALPGFSKGTSYNDDNDLKPFDEDKKPSSIELRDVSYQFPGTQNRIFEHLNLSIAA
GECIAITGDTGAGRSTLLQLMSGVIAPTEGSVLVNGKSISEIDLRKISEEIAYLPQTTQM
FEGSLLDNASVFDAKRVDRALATAKSLGLGDFVSKMPRGWDSPVGDMATDSLPPGYRQRI
AIVRALSNQPSIVLIDDPTSTIDSEGDSVFLRFLEAVKGKVTLVIVSQRPSYLRLADKTW
FLSGGTLTYIEPGQVTSLSGTPINKPQSAATDIALVGSDSDKGGSYQALSSAEFFDSPLK
RGHIDSKRWERTNETVNSNFKNETDLSACLTLLLKLMNSRGTPREVAESLPYFTESLDLP
GFHNAMAQLGYKVVKVHCPLGDLDARSLPCLFLPDDGFGFIAMGRVGKHMRKGVSESAEV
DLEPNLNMMGEAFFYELADNKTPENRSWVFRVMLRFSPLIGQATISALVTGLVIMAGPLF
LMAVYSTIIPSGAQDTLLYLGIGSVLALIVAFFFMRQRARILSYIAGRIEYLFGATILQQ
VFKMSPAYTERASVGSQTSRLQSFEAIRDLFVGPLASTVLESPATIILLIALSIINPIAL
LVFIIMATVYGVLYWIFSVPTRDRVAAVSKESTKRNEFLVEMITKMRVVRECGAQTLWLE
RFREISANATMASFRAEQMSSLLMGVSYFVMMLSALLIVTATVPAVFSLTVSSGALIASM
MLMWRVLTPIQTVFTNMTRIERVSNATRQIDGLMKIQGEGNGSASSLVARGLEGSVEFAR
VSFRYSLNVDPALIGVEFKVSPGEMVAISGPNGGGKSTLLKLILGMYQPQAGAILIDNVD
IRQLDPIELRRMVGYAPQDIQLFRATIAQNLRLARPDASDDEVYQALDMAGALEQVLALP
RGLEYRVGDNTNDLPTNLKQKLSLARAYLTRAPIMLFDEPGAGLDELGDRKFMETLREMK
GKTTVIFISHRPSHIRLADTLLVLDKGYLRAAGPPNELLKQPAAA
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttcttacaaaagatctggtcagttctccaatactgcggtcgttcgttgaag
ttaggagcaattactttattcgtggcagtaaagtcagatttactccacctagtaggccag
ctgagtagcaaaagcaaaaccattagtaaaagtaaggcgtttaataaacagcaagcccaa
gatttactttctgcaaatttattaaagacaaaacccagtcattggttgcctcatttgagg
gcgcattggcaagctgctatcaaaacgattcggtttgagtggcaagaatttaaagttgaa
atttctattttgcttgagcgaattcatcaaattcgcaatcaaacaaaagaacagaaattg
gtgggaatgttatccgcctttgatacagagagaaaaaccattttagcggccagtattgtg
attaatattttggccttggcatttccattgctgatgttgcagttgtatgaccgcatattg
ccgcatcaatctttagatactttggggctattcgctattactgtaggaattgctgttgct
ctcgagtcgattacacgagtagcaagatcctatacaaccgcatggatttctgcgcgattt
gaacataaggccatgatggaagtggccgaaagagtcttggtggagcctcttcatgcattt
gagcgccagggcacaggtgctgtaatggaaaacttcaaatcaatttccagcctgaagtat
cactattccggacaaacctttcagcagctaatggatcttccatttactctgttatacgta
ctgatcatttttattctcaatatctggattggtttggtcgttactttcggttatgcagta
tttgtctatatcacctggaagatggggcgcaatgatcctgagttaatcaaagagcagaag
gcagcagatttgcgccgtagtaattttttgaatgaaacgctgggcaatatccatacgatg
aaatcaatgtcgatggaggcattgatgttgcgtcgttatgagcgcctacaagaatctggc
gcacgtatcatggctcgtatgacctatgcgagtgacatgtcatcgggtgtgggtaatatc
ttctcgccgctaatgacaaccatcattgtcgctttaggggcatatcttgttattacgcat
caccttactaatggtgaattagcagcttgtattttgctgggaatgcgttccttggcgcct
ttgcagcgattgggcggcatgtggactaagtttcaacaggatgaagtacttcgtgatggc
ttggcaaaaactttggctttgcctggattttcaaagggcacaagctataacgatgacaat
gatttaaagccatttgacgaggataagaagccttcctctattgagttgcgcgatgtcagc
tatcaatttcctggtactcagaatcgaatttttgagcatctcaatctgtcaattgctgca
ggagagtgtattgctataactggcgatactggagcagggcgaagcacattactacaactc
atgtcgggtgttatagcgccaactgagggaagtgttttagtcaatggcaaaagtatttca
gaaattgatctacggaaaatttctgaggaaattgcctatctacctcaaaccacgcaaatg
tttgaaggttcattgctcgataatgcgagtgtctttgatgctaagcgggtagatcgtgca
ttagccacggcaaaatctcttggtcttggagactttgtatccaaaatgccacggggttgg
gattcaccagtgggggatatggcaaccgattcattgcctccggggtatcgtcagcggatt
gccatcgtacgtgcgctttctaatcaacccagtatcgttttaattgatgatccgacttct
acgattgattcggagggagactcagtctttttgcgtttcttagaagctgttaaaggtaag
gttaccttagtaattgtttcccaaagaccatcttatttacggctagctgataaaacctgg
ttcttgagtggcggaactctgacttatattgagcctggtcaagtgaccagcttaagcggt
actcctataaataagcctcagtcggctgctactgatattgccttagtaggttctgattct
gacaagggtggtagttatcaagcgctgtcaagcgcagagttttttgactcgcccttaaag
cgcgggcatattgattcaaagcgttgggagcgaaccaatgaaacggttaacagtaatttt
aaaaatgaaacagatttatcggcctgtctgaccttattgcttaagctaatgaattcacgt
ggtacgccacgtgaggtagcggagtctttaccttactttactgaaagcctagatttgcca
ggctttcataatgcgatggctcagttaggttacaaagtagtcaaagtacattgtccgttg
ggcgatttggatgcgcgttctctgccgtgcttatttttacctgatgacgggtttggcttt
atagcaatgggtcgcgtcggaaagcacatgcgtaagggtgtcagtgagtctgctgaagtg
gatctagagcccaatctgaatatgatgggcgaagcattcttttatgaattagcagacaac
aaaacacccgagaatcgctcttgggtatttagggtgatgttgcgcttctcaccactcatt
ggccaggctactatttccgctttggttactggtctggtaattatggctggaccattattc
ttgatggcagtttatagcaccatcattccttcaggcgcacaagatacgctcttatattta
ggaatcggatctgtactggcacttatcgttgcgttcttttttatgcgtcagcgagctcga
attctctcttatattgctggtcgtattgaatacctattcggcgcaaccattttgcagcag
gtatttaagatgtctccagcctataccgagcgtgcttctgtagggtcgcaaacatcccgc
ttacaaagctttgaggctattcgtgatttatttgtgggaccacttgcctctacagtgctg
gaatctcccgccaccatcattctattgatagccctatccatcatcaatccaatcgccctt
ttggtattcatcattatggcaacggtatatggagtcttgtattggattttctctgtacct
actcgcgatcgcgttgccgcagtaagtaaagaatccaccaagcgaaatgaattcttagtg
gagatgattactaagatgcgtgtggtacgtgaatgcggagcccaaactctctggctagag
cgttttagagagatttctgcaaacgctactatggcttcttttagggcagagcagatgtca
tcgttattgatgggcgtctcctactttgtcatgatgttatctgctctcctgattgtgact
gcgactgttccagcagtgttttctttgaccgtatcttctggtgccttaattgcctccatg
atgttgatgtggcgggtgttaactccaattcaaacagtctttactaatatgacccgtatt
gagcgagtgagtaacgctacccgtcaaattgatggcctcatgaaaattcaaggtgagggc
aatggttctgcaagctccctggttgctagaggattggaaggttccgtagaatttgcacgc
gtttctttccgctactcgttaaatgtagatcctgcattaattggcgtggaatttaaagta
tctcctggtgagatggtcgcgattagtggccctaatggcggtggtaaatcgacattactc
aaactcattttgggaatgtaccaaccccaagctggagcgatattgattgataacgttgat
atccgtcagttagacccgattgaattgcgccgcatggtcggatatgccccgcaagatatt
cagctatttagagccacgattgcccagaatctacgcttagcacgtcctgatgcaagtgat
gatgaggtttatcaagcgctcgatatggctggggctcttgagcaggtattagcgttgcca
agaggcttggaataccgtgtgggtgataacacgaacgatttgccaactaacttaaagcaa
aagctttcattggcgcgcgcctacttaacccgtgcaccaatcatgttatttgatgagcct
ggtgccggtttagatgaattgggcgatcgtaagtttatggaaaccctaagagagatgaag
ggtaaaactacggtgatctttattagccatcgtcctagtcatattcgtttggcagacaca
ttattagttttggataaagggtatttgcgtgccgctggaccaccgaatgaattattgaag
cagccagcagcagcctag
DBGET
integrated database retrieval system
