Polynucleobacter yangtzensis: PKF023_13990
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Entry
PKF023_13990 CDS
T08788
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pyt
Polynucleobacter yangtzensis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_13990
Enzymes [BR:
pyt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PKF023_13990
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PKF023_13990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDT77596
UniProt:
A0A9C7FIF4
LinkDB
All DBs
Position
complement(1462559..1464094)
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AA seq
511 aa
AA seq
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MKHPERLILILGDQLDLQSSALRDINPKSDQIIMIESANEAQYVWTHKAKIALFLSAMRH
FAVELEKQGYPLTYIKSSPLSIVEVLREQIQKNKVKRLVCIEPGEWRLKQALEALAKDLG
IELEMREDEHFYCSRQEFVEWAANKKEFRLEYFYRLMRKRHNILVDREGNPEGGQWNFDQ
DNRRPYPKKGPGIIDAPASFEVDAITQEVLDWVQKTYPDHPGSLDVFNWPVTREQAVQAL
EYFVEYRLRNFGVYQDAMWTDTPFGWHSILSSALNLKLLNPREVVNAVLVAWRKYSLDLS
TIEGFIRQVLGWREFVRGMYYLDMPKMAQDNYYQHQRPLPKWYWNGQTQMACMKDAIGQT
LQYGYAHHIQRLMVTGNFALLAEILPQEVCEWYLAIYVDAIEWVELPNTAGMALFANGGR
FTSKPYIASGAYIKRMSNYCGSCKYKPEVRYGEDACPITTLYWNFLIKHREQFEASPRTR
LMTANLKRISDEDQKEITLHAQKILNHLDDL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatcctgagcgcctcattctgattttgggtgatcagcttgatttgcagagctct
gccttgcgagatattaatcccaagtcggatcaaatcatcatgattgaatcggccaatgag
gcccagtatgtttggactcataaggccaaaatcgctctatttctatcggcaatgcgtcac
tttgcagttgaacttgaaaagcagggttatccgctgacttatataaaaagttcgccactg
tcgattgttgaggttctgcgagagcaaatccaaaaaaataaagtgaagcgtttggtttgt
attgagccaggcgaatggcgtctcaagcaggcgctcgaagcattagcaaaagatcttggt
attgaattagaaatgcgggaggatgagcatttttattgctcccgccaagaattcgtagag
tgggcagcaaataaaaaagagttcaggctggagtacttctatcgattgatgcgtaagcgg
cacaatatattggtagaccgtgaaggcaatcccgagggcgggcagtggaactttgatcaa
gataaccgcaggccctatcctaaaaagggtccaggcatcatcgatgctccagcatcgttt
gaagtcgacgcaatcacacaagaagtgctggactgggttcaaaagacttacccagatcac
cctgggtctctagatgtatttaattggcccgttactagagagcaagcggttcaagccctg
gaatattttgtcgagtaccgcttaagaaactttggtgtttatcaagacgcgatgtggact
gatacaccctttggatggcactctattttatcgagtgcactcaacctgaagttgcttaat
ccgcgcgaagtggtgaatgcagtgttagtggcttggagaaaatattctttagatctttca
actattgaaggcttcattcggcaggtattggggtggcgcgagtttgtacgcggcatgtac
tacctagatatgccaaagatggcgcaggataattactaccagcatcaacgcccattgcca
aagtggtactggaatgggcagacacaaatggcttgcatgaaagatgccataggccaaaca
ctgcaatatggctatgcgcatcacattcagcgcttaatggtgacaggtaactttgctctt
ttagcagaaattctgccgcaggaagtatgtgagtggtacttggctatatatgtggatgcg
attgaatgggttgagcttcctaatacggcaggcatggccttatttgctaatggcggtaga
tttacaagcaagccttatatagccagtggagcctacattaagcggatgagtaactattgc
gggtcttgtaaatataaacctgaggttcgttacggagaagatgcatgccccatcacaact
ttgtattggaatttcttaatcaagcatcgagaacaatttgaggctagcccaagaacgaga
ctcatgacggctaatctgaagcgtattagtgacgaagatcaaaaagaaattacgctgcat
gcacagaaaatactaaatcacttggatgatctttga
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