Polynucleobacter yangtzensis: PKF023_15300
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Entry
PKF023_15300 CDS
T08788
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt03030
DNA replication
pyt03430
Mismatch repair
pyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKF023_15300
03430 Mismatch repair
PKF023_15300
03440 Homologous recombination
PKF023_15300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyt03032
]
PKF023_15300
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_15300
Enzymes [BR:
pyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKF023_15300
DNA replication proteins [BR:
pyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PKF023_15300
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PKF023_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDT77727
UniProt:
A0A9C7CYY4
LinkDB
All DBs
Position
complement(1583741..1585135)
Genome browser
AA seq
464 aa
AA seq
DB search
MNKQSIDYPTLAFIDIETTGSNFDRDRITEIGIKTLSNNGASIWESLINPHVYIPQNIQR
LTGISPQMVSDKPGFEEIARDLKAELEGKIFVAHNARFDYGFIKASFKRMGVDFKPKVLC
TVKLSRLLFPNQARHNLDTIIREHGLTVSARHRALGDADLLFQFWQICERAVGKERLLEA
LNQLVGNASLPPNIDQELIDSIPDAPGCYIFYGENRNPLYIGKSISLRSRVMGHFQGSLT
QRKEMKLSLQVRDIDWIETSGELGALILESKLIKERMPSMNIKLRRSRDLCAWSLNKDAN
GVLKPTLVNHKDLMPGLQDNLFGLFYNKREANSYLKAIAKKYRLCEVLLGLEKAVDGKAC
FGYQVKQCGGACIGIMPTEMHNLQLRTAMELYRVQVWPYKGPIAIKDNGEMIVLDKWCYL
GTAINEDELTELKSAGDAEFDLDIYKIVKKALAGQYQNQVIHLS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaatcgatcgattatccaactcttgcttttattgatatcgagacaactggt
tcaaattttgacagagatcgtattacagaaataggcattaaaacgctttccaataacggg
gcatctatctgggagagcttaatcaacccccatgtatatattccgcaaaatattcaaaga
ctcactgggatctccccgcaaatggtctctgacaagcctggctttgaagaaattgccaga
gacctaaaagcagagctcgaaggtaagatatttgttgcccacaatgcgcgctttgattat
ggatttattaaggcctcttttaaaagaatgggtgtggatttcaagcccaaggttttatgt
accgtcaaactctcaagactcctatttcccaaccaagctcgtcacaacctagacaccatc
attcgtgagcatggtttgactgtcagtgctagacatagggcgcttggcgacgcagactta
ctttttcagttttggcaaatttgtgagagagcagttggtaaagagcgtttgctagaggct
ctgaatcagttggtgggaaatgcaagtctgccaccgaacatcgatcaggaattaattgac
tcgatacctgatgcgcctgggtgctacatcttttatggagaaaatagaaaccctttatat
attgggaagagtatttccctgcgcagtagggtgatggggcactttcaaggctcgttaacg
cagcgcaaggaaatgaaattatctttgcaggtaagagatattgactggattgaaacgagt
ggagagctaggggctttaatattggagtctaagcttattaaagagcgcatgcccagtatg
aatatcaagcttcgacgatcaagagatctttgtgcttggagtctcaataaagatgctaat
ggggtgctaaagccaacgcttgtgaaccacaaagatctcatgccgggcctgcaagacaat
ctttttggtttgttttataacaaaagagaggctaactcctatctaaaggcgattgcaaaa
aaatatcgcttatgcgaggtattgctggggcttgagaaagcggttgatggaaaagcctgc
tttggatatcaagtgaagcaatgtggtggcgcatgcataggcatcatgcctactgaaatg
cataatctgcaattaaggacggcaatggagttatatcgggtgcaggtttggccttacaag
ggcccaatagccatcaaagacaatggagaaatgattgtcttggataaatggtgctacttg
ggtactgccattaatgaggatgagttgactgaactcaaaagtgctggcgatgctgaattc
gatcttgatatttataagatcgttaaaaaagcattagccggacaatatcaaaaccaagtg
attcatcttagttaa
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