Polynucleobacter yangtzensis: PKF023_15470
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Entry
PKF023_15470 CDS
T08788
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
pyt
Polynucleobacter yangtzensis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PKF023_15470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyt03021
]
PKF023_15470
Transcription machinery [BR:
pyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PKF023_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BDT77744
UniProt:
A0A9C7CJY3
LinkDB
All DBs
Position
complement(1598206..1600785)
Genome browser
AA seq
859 aa
AA seq
DB search
MPNTKTKKPAPKAKAPAKPVKAAAKPAAKAKAPAKPAPKAKTPAKPVKAAAKPAAKPVAK
AKAPAKPAPKAKTPAKPVKAAAKPAPKAKAPAKPVKAVSKAPAKPVKAVAKAPAKPVKAA
AKPVLKAPAKSAKAEVKVEPAKKGKAVAAPKAEPVKETKAAKETKDAKEVKGKKAKTAEL
EAPVVVEEEKKRGRKAKADAPAEAAEPVLTDRQKARERKAKEKALLKEFAAQQLGTEEQQ
ELRRARLKTLIKMGMSKGYLTHGEMNDVMSDELSDADALETLISLLNDIGITVYEQAPDA
ETLILSDNTAAAASEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVDLLTREGEIV
IAKKIEAGLKDMVMALAACPVTIAEILSNVDKIASGEMEIDQFVDGLVDPNAEDIKLGPE
EPEVDPDAEESEEGGEEDEGSGGGGGAATANAKQLEELKQISLEKFAIVRTQADKMRRAF
DKDGYNCPAYVKAQDAIRAELLGFRLTAKSVEKLCDTMRSQVDQVWKLERGIVSLLVDKV
GVNRGEVLKDFPKMSMNLTWTEKLLKENKPYSALLQRNVPAIQELQQKLIDIQKNVVIPL
PELKEVNRQMIAGEKRAREAKREMTVANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETG
HEPDAATLALKMEIPEDKIRKIMKIAKEPISMETPIGDDEDSHLGDFIEDGNTLAPAEAA
LHDSMRDVVKDVLDSLTPREAKVLRMRFGVEMSTDHTLEEVGKQFDVTRERIRQIEAKAL
RKMRHPSRSDKLKTFLEED
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataccaagaccaaaaaaccagctccaaaagcgaaagctccagctaagccagta
aaggctgccgcaaaaccagctgctaaagcaaaggcgccagctaagccagctccaaaagca
aaaacacctgctaagccagtaaaggctgctgctaaaccagcggctaaacctgtggccaaa
gcaaaggcgccagctaagccagctccaaaagcaaaaacacctgctaagccagtaaaggct
gctgctaaaccagctccaaaagcgaaagctccagctaagcctgtaaaagcagtttctaag
gcgcctgctaaaccagttaaggctgttgcaaaagcaccagcaaaaccagtaaaggctgca
gcaaaaccagttttaaaagctcccgcgaaatctgccaaagcagaagtcaaggttgagcca
gcgaaaaaaggtaaagcagtagcagcacctaaggctgagccagttaaagaaacaaaggca
gcaaaagaaactaaagatgcaaaagaagtcaaaggcaaaaaagccaagactgcagaacta
gaggcgcctgtagttgttgaggaagaaaagaagcgcggtcgcaaagccaaagcggatgca
cctgctgaagctgctgaaccagtattaacggatcgtcaaaaagctcgtgagcgtaaggcg
aaagagaaagcgctcttaaaagaatttgcagcacaacagctaggaactgaagagcaacaa
gagttacgccgtgctcgcttgaagactttgatcaagatgggtatgtccaagggttactta
acccatggcgagatgaatgacgtgatgtctgatgagttgtccgatgcggatgcattggaa
actttgatcagcttgctcaatgacatcggcattactgtttacgaacaagcccctgatgca
gaaacattaatcctttctgacaatacagctgctgcagcttctgaagaagaggctgaagaa
gaagctgaagctgctttatctactgttgattcagaattcggacgcactactgatccagta
cgtatgtatatgcgtgaaatgggtacggttgacttgctgactcgcgaaggcgagatcgtg
attgcgaagaagatcgaagctggtctcaaagacatggtgatggctttggctgcttgccct
gtaacaattgccgagattctgagcaacgttgacaagatcgctagtggcgagatggagatt
gatcagtttgtggatggattggttgatcctaacgcagaagatatcaaacttgggcctgaa
gagccagaagtcgatcctgacgctgaagaaagtgaagaaggcggcgaagaagatgaaggc
agcggtggcggcggtggtgctgcaacagcaaatgccaagcaattagaagaattaaagcaa
atctctttagagaagtttgcaatcgttcgcacacaagctgacaagatgcgccgtgcattt
gataaagatggttacaactgtccagcatacgtgaaggcgcaagatgcaattcgtgctgaa
ttacttggtttccgtttaacggcgaagagtgttgagaagttatgcgacaccatgcgttca
caagtagaccaagtatggaagcttgagcgcggtattgtgagtttgttagtagacaaagtt
ggtgttaatcgtggtgaagtattaaaagacttccctaagatgtctatgaatttgacttgg
actgagaagttgctcaaagagaacaagccatacagcgcactcttgcaacgtaacgttcca
gctattcaagaactacaacagaagttgatcgatattcagaagaatgtcgttattccgttg
ccagaattaaaagaagttaataggcaaatgatcgctggcgagaagcgtgcccgcgaagca
aaacgtgagatgactgtagccaacttacgtttggtaatctcgattgctaagaaatacacc
aaccgtggcttgcagttcttggatttgattcaagaaggcaacattggcttgatgaaggcg
gtagataagtttgaataccgtcgtggttataagttctcgacttatgcaacatggtggatt
cgtcaggcgattacccgttcgattgctgaccaggcacgtacgatccgtatcccagttcac
atgattgagacgatcaacaagatgaaccgtatcagccgtcaaattttgcaagagactggt
catgagccagatgctgcaaccttggcgctgaagatggagattcctgaagacaagatccgc
aagatcatgaagattgctaaagagcctatctccatggagacaccaattggtgacgatgaa
gattctcatttaggcgacttcattgaagacggtaatactttggctccagctgaagctgca
ttgcatgactctatgcgcgatgttgtgaaagacgttctcgattcattgacaccacgcgaa
gcaaaagtattgcgtatgcgctttggtgttgagatgagcactgatcacactcttgaagag
gttggcaaacagtttgacgttactcgtgagcgtattcgtcagattgaagctaaggctctg
agaaagatgcgtcatccaagccgtagcgacaaactcaagaccttcctcgaagaagattga
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