Polynucleobacter yangtzensis: PKF023_17130
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Entry
PKF023_17130 CDS
T08788
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pyt
Polynucleobacter yangtzensis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyt03016
]
PKF023_17130 (miaB)
Enzymes [BR:
pyt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PKF023_17130 (miaB)
Transfer RNA biogenesis [BR:
pyt03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PKF023_17130 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BDT77910
UniProt:
A0A9C7FB33
LinkDB
All DBs
Position
1771863..1773209
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AA seq
448 aa
AA seq
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MKKLYIKTFGCQMNEYDSGKMADLLHADEGMVMTDRPEDADVVLLNTCSIREKAEDKVFS
DLGRLRELKKTKPNLLIGVGGCVASQEGQQIVSRAPYVDVVFGPQTLHRLSDLIAERRKT
GISQVDISFPEIEKFDHLPASRQTRGSAYVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDV
LTEVAGLASKGVKEIVLLGQNVNAYLGKMGGTEEIADFALLIEYIAEIPGVERIRFTTSH
PKEFTQRLIDVYAKVPKLVSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAVRPDL
TLSSDFIVGFPGETEADFEKLLKMVKELNFDNSFCFIFSPRPGTPAANLHDDTPYDVKLK
RLQTLLALVEGQANQISQKMLGNTERVLIEGLAKDGINLQGRAENNRVIHFTAPDQDIES
LIGQIVDIRITEVLNYTLRGELVEVNVS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctctatatcaaaaccttcggctgtcaaatgaacgagtatgactcgggcaag
atggccgacctattacatgccgacgagggcatggtcatgacagatcgaccagaagatgcc
gatgttgtccttctcaatacatgctctattcgcgaaaaagctgaagacaaagtcttttcg
gacctaggtcgacttcgcgagcttaagaaaacaaaacccaacctattgattggtgttggt
ggctgcgtagcaagtcaagaaggtcagcaaattgtcagtcgcgcaccatatgttgacgtg
gtctttggcccgcaaacattgcatcgcctctctgatctcattgcagaaagacgtaaaaca
ggcatctctcaagtagacatttcatttccagaaattgaaaaatttgatcatctgccggca
tcacgacaaacccgtggctcagcctatgtatcgatcatggaaggctgctctaaatactgt
agttactgcgttgtaccttacacacgcggcgaagaagtttccaggccttttgacgatgta
ctcaccgaagtagcgggccttgccagtaagggtgtgaaagaaatcgtcctgctaggtcaa
aatgtgaatgcttatttaggtaagatgggcggtaccgaagagatcgcagactttgctctt
ctcatcgaatacattgctgaaattccaggggttgaacgaattcgatttactactagccac
cctaaggaatttacacagcgcctcattgatgtctatgcaaaagtaccgaagcttgtaagc
cacttacacctccctgtccaacatggatctgatgctatgttgtcagccatgaaacgtggc
tacacagcattagagttcaaaagcatcattcgcaaaatgcgcgcagtgcggcctgatctc
actctatcgagtgacttcattgtgggctttccaggagagactgaagcagactttgagaag
ctactcaagatggtcaaagaattaaattttgacaatagtttttgttttatcttcagccca
cgcccaggaacaccagctgcaaacttacacgatgacacgccttacgatgtcaagctgaag
cgccttcaaacattactagctcttgttgagggtcaggcaaatcaaattagccaaaaaatg
ttgggtaatactgaacgagtgctgatcgaaggtcttgctaaagacggtattaacttgcaa
ggacgtgccgaaaataatcgcgtcattcatttcacggcaccggatcaagatattgagagt
ctcattggtcagatcgtagacatacgcatcaccgaagtccttaactacacccttaggggt
gaattggtagaagtaaatgtcagctaa
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