Polynucleobacter yangtzensis: PKF023_17340
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Entry
PKF023_17340 CDS
T08788
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PKF023_17340 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_17340 (ruvB)
Enzymes [BR:
pyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PKF023_17340 (ruvB)
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PKF023_17340 (ruvB)
RecFOR pathway proteins
PKF023_17340 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
AAA_22
AAA_14
Rad17
AAA_3
NTPase_1
AAA_18
DUF815
TsaE
RNA_helicase
AAA_33
AAA_17
AAA_24
ABC_tran
Bac_DnaA
Sigma54_activ_2
AAA_28
NACHT
NB-ARC
IstB_IS21
bpMoxR
AAA_25
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BDT77931
UniProt:
A0A9C7CC07
LinkDB
All DBs
Position
1794851..1795921
Genome browser
AA seq
356 aa
AA seq
DB search
MAIHTDDLSSIPEDLPEGNDRIVSGSAGNSEAVFERALRPKQLDEYVGQTKARAQLEIFI
SATRARQEALDHVLLFGPPGLGKTTLAHIIARELGVNLRQTSGPVLDRPGDLAALLTNLE
ENDVLFIDEIHRLSPVVEEILYPALEDYSLDIMIGEGPAARSVKIDLKPFTLIGATTRAG
MLTNPLRDRFGIVARLEFYTTEELTKIINRSASLLKADIDPEGSVEIAKRARGTPRIANR
LLRRVRDYAEVKGTGTITKAMADAALKMLDVDPSGFDVMDRKLLEAILHKFDGGPVGIDN
LAAAIGEERDTIEDVLEPYLIQQGYLQRTSRGRVATRQAYEHFGLTPPSGSASLDI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcatacagacgacctaagctccatccccgaagatttaccggaaggcaatgac
cgcattgtgagcggctcagcgggtaattctgaggccgtctttgagagagcgctacggcca
aaacaacttgatgagtatgttggtcaaactaaagcacgcgcccaattagagattttcatc
agcgccacaagagcacgtcaagaagccttagatcacgttctcttatttgggcctcctggc
cttggtaaaactaccttggcccacatcattgccagggagcttggcgttaacttgcgccaa
actagcggccccgtactggataggcccggtgatcttgctgccctactaactaatctagaa
gaaaacgatgttctctttattgatgagattcatcgcctatctcctgtggttgaggaaatt
ctttacccagcactagaagattacagtcttgacatcatgattggcgaaggccctgcagca
cgcagcgtaaaaattgatctcaagccattcacattgattggtgccaccacccgtgctggc
atgctgaccaatccattacgtgatcgctttggcattgtggcaagactggagttctacacc
accgaagaactgaccaaaattattaatcgctcagccagtctgctcaaggccgatattgat
ccagagggatcagtagaaattgctaagcgtgcacgtggcactccacgtatcgcaaaccga
ttactacgtcgtgtacgtgactacgcagaagtcaaaggcacgggaaccattactaaagct
atggctgatgcagccttgaagatgctagatgtcgatccaagcggctttgacgtaatggat
agaaaattactagaagccatcttgcacaagtttgatggtggcccagtgggtatcgataac
ttggcagcagctattggcgaagaacgcgacaccattgaagacgtgcttgagccatatctg
attcagcagggctacttacagagaacctcgcgtggacgagtagcaacacgccaggcttat
gagcattttggattaacgccgcctagcggcagcgctagtctagatatttaa
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