Polynucleobacter yangtzensis: PKF023_17460
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Entry
PKF023_17460 CDS
T08788
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PKF023_17460 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pyt01007
]
PKF023_17460 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyt03016
]
PKF023_17460 (aspS)
03029 Mitochondrial biogenesis [BR:
pyt03029
]
PKF023_17460 (aspS)
Enzymes [BR:
pyt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PKF023_17460 (aspS)
Amino acid related enzymes [BR:
pyt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PKF023_17460 (aspS)
Transfer RNA biogenesis [BR:
pyt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PKF023_17460 (aspS)
Prokaryotic type
Other AARSs
PKF023_17460 (aspS)
Mitochondrial biogenesis [BR:
pyt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PKF023_17460 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BDT77943
UniProt:
A0A9C7FK77
LinkDB
All DBs
Position
complement(1806783..1808582)
Genome browser
AA seq
599 aa
AA seq
DB search
MSMRSHTCGQVTDSLIGQEVTLSGWVNRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFA
LAEQVRSEFCIQIKGLVRARPAGTENVDLVSGKVEILCHSLVILNASVTPPFQIDDENLS
ETTRLTHRVLDLRRPQMQKNLRLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYL
VPSRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETA
FLSELEIRDLFENMIRHIFKKTMNVELPNPFPTMPYSEGMARFGSDKPDLRVNFEFTELT
DLMKDVDFKVFSGAANQVGGRVVGLCVPGGAEISRSEIDDYTQFVSIYGAKGLAWIKVNS
VAEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIGQS
AWGKEHGLFTEGWKPLWIVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLESDPGKCLA
KAYDMVLNGSEIGGGSVRIHQEAVQSQVFRALKIDAEEAQAKFGFLLDALQYGAPPHGGI
AFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQAAPAA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcgaagccatacctgcggccaggtaaccgattcactgattggtcaagaagtc
actctctctggttgggtgaatcgtcgccgtgaccacggaggcgttatctttattgacttg
cgtgaccgcgaaggttttgtgcaagtagtttgcgatccagatcgtccagagatgttcgcc
ctggctgagcaagtgcgtagcgagttctgcatacagattaagggtctcgtgcgtgcacgt
cctgctggtactgagaatgtagatttagttagtggaaaagtagaaattctttgccatagc
ttagtgatcttgaatgcgtctgtaacaccaccattccaaattgacgatgagaatttatcc
gagactactcgtttgactcatcgtgtattagatttgcgtcgtccacaaatgcaaaagaat
ttgcgcttgcgttacaacgttgcaatggagtgccgtcgttatttggatgacgcaggattt
atcgatattgaaacaccaatgctcactaagagtaccccagaaggcgcgcgtgattattta
gttccatcacgtgtacatgatggccagttctttgcattgccacagtctcctcaattgttt
aagcagttgttaatggtggccggctttgatcgttactatcaaattacaaagtgcttccgt
gatgaagacttacgcgcagatcgtcagcctgaatttacgcagatcgactgtgaaactgct
ttcttgagcgagttagaaattcgtgatttatttgaaaacatgattcgtcatattttcaag
aagacaatgaatgtcgagttgccgaatccattcccaacaatgccttactcagaaggtatg
gcgcgttttgggtctgataagccagatttgcgcgtgaactttgagttcactgaattgacg
gatttgatgaaagacgttgatttcaaagtgttctcaggcgcagcgaaccaggttggcggc
cgcgtagtaggcttgtgtgtgcctggtggtgctgaaattagccgtagcgaaatcgatgac
tacacccagttcgttagcatctatggcgccaaaggtttggcgtggattaaggtcaattct
gtggctgaaggccgcaatggtttgcagtcaccaatcgtgaagaatttgcatgacgctgcg
attgaaggcatcttgaagcgcactggtgcaaaagatggcgacatcattttctttggcgct
gataaagaaaaagtagtaaacgatgcaatcggtaatttacgtctacgtatcggtcaatct
gcttggggtaaagagcatggactgtttacagaaggctggaagccattatggatagttgac
ttcccaatgtttgattacgatgaaggcgaagcgcgctgggttgcttgccatcatccgttc
accagccctaaagatgagcatatgcagtacttggagtctgatccaggcaagtgcttagcc
aaggcttatgacatggtgttgaacggtagtgaaattggtggcggttctgtacgtattcat
caagaagcagttcaaagccaggtattccgtgcattgaagattgatgcggaagaggctcaa
gctaagtttggtttcttgttagatgcactccaatatggtgcgcctccacacggtggaatc
gcatttggtttggatcgtatcgtcaccatgatgactggtgccgaatcaattcgagatgta
atcgccttccctaaaacacagcgtgcgcaatgtttattaactcaggctcctagcccagtg
gatgagcgtcaattgcgtgagttacacattcgcttgcgtcaagcagcacctgctgcttaa
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