Polynucleobacter yangtzensis: PKF023_17710
Help
Entry
PKF023_17710 CDS
T08788
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKF023_17710 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_17710 (mutM)
Enzymes [BR:
pyt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PKF023_17710 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKF023_17710 (mutM)
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKF023_17710 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
DUF5817
RNHCP
Motif
Other DBs
NCBI-ProteinID:
BDT77968
UniProt:
A0A9C7C6N6
LinkDB
All DBs
Position
complement(1835202..1836038)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVEVTRLGIAPHLEGRKVTAVKIIDGRLRWPVPVSLSKSLPGQKVSTIERRGKYL
LLEMDTGYLLIHLGMTGTLRVVPSSDPLKTHDRVTFEFGKLSLRLHDPRKFGAVLWHPKS
KGPIEKFTLLQKLGVEPFSPEFSGELGAEVLYQSSRKRSVAVKQFLLAGQAVVGVGNIYC
SESLFEAGIHPAKAAGKLTRPQCSRLAQAVRLILKKAIDAGGSSLKDFVNSDGDPGHFMV
QTKVYDRKGLPCKVCKTPISQIVQGQRSTYFCPQCQKR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagtagaggtcacacgattaggaattgcgcctcaccttgaggga
cgcaaagtcaccgccgtcaaaatcattgatgggcgcttgcgttggcccgtccctgtaagt
ctaagcaaatccttgccggggcaaaaggtcagcaccatagagcgtcgcggcaagtacctc
ttattggaaatggatacgggttatttgctcattcatttggggatgacgggaaccttgcga
gttgtaccaagctcggatcccctgaagacccatgatcgagtaacgtttgaatttgggaag
ttgagtttgcgtttgcatgaccctagaaaatttggcgccgttttgtggcaccctaaatct
aagggccctattgaaaaatttacgcttttgcaaaagctgggagtagagccattctctcca
gagttttcgggagaattaggtgcagaggttttgtatcaatcttcgcgcaagcgtagtgtt
gcagttaaacaatttcttttggcaggccaagcagttgtcggtgttggcaatatttattgt
tctgaaagtttatttgaggcaggcattcatcctgctaaggcggccggaaagttaactcga
ccacaatgttcgcgccttgcacaggctgtcaggttgatactaaaaaaagcaattgatgcc
ggtggtagctcactaaaagattttgtgaatagtgatggcgatccaggacatttcatggtc
caaaccaaggtctacgatcgcaaggggttgccatgcaaggtatgtaaaacgcccattagc
cagatagtgcagggtcagcgctccacctacttttgcccacaatgtcaaaaacgctga
DBGET
integrated database retrieval system
