Polynucleobacter yangtzensis: PKF023_17830
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Entry
PKF023_17830 CDS
T08788
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pyt
Polynucleobacter yangtzensis
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyt03021
]
PKF023_17830 (rpoH)
Transcription machinery [BR:
pyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PKF023_17830 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
BDT77980
UniProt:
A0A9C7CNW5
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All DBs
Position
1846248..1847171
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AA seq
307 aa
AA seq
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MVQKKSDKPNLQTLPVAQTAAASAFPMLPTLGVGTLDSYIAYVNRVPMLSAAEELHLAQE
FRRTENVDAAKTLVLSHLRLVVSVARQYLGYGIPHADLIQEGNIGLMKAVKRYDPNNGAR
LVSYAIHWIKAEIHEYILKNWRLVKTATTKAQRKLFFNLRSNKPTLSALTPSEVEALAKA
LDVKGSDVKEMEMRLAGGDVALEGDDSDDESAYAPIQWLADNSQEPTARIASAEADALQG
PKLDQALMALDERSRNIVQSRWLAMDAEGNGTKTLHDLADEYGISAERVRQIETAALKKM
RGLLQAA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaagaaatctgacaaaccgaatttgcaaacgctgccagtcgcgcagactgcg
gcggcgtctgcatttccaatgctgccaactcttggggttggcactctcgattcatacatt
gcgtacgttaatcgcgtaccaatgctcagtgctgcggaagaattgcatcttgcgcaggaa
tttcgtcgcacagaaaatgttgatgctgctaaaactttagtgctgtcacatttgcgttta
gtggtttctgttgctcgccaatatcttggatatggcattccacacgcagacttaattcag
gaaggcaatatcggcttgatgaaagcagtaaaacgctacgacccaaacaatggtgctcgc
ttagtgtcttacgcgattcattggatcaaagcagaaattcatgagtacattctcaagaac
tggcgcctggttaaaactgcaaccactaaagcacaacgtaaattgttctttaacttgcga
agcaataaacctaccttaagcgcactaactcctagcgaagtagaggctttggccaaagca
cttgatgtcaaaggttctgacgttaaagaaatggaaatgcgccttgctggcggagatgtt
gcgcttgaaggcgatgacagtgatgatgagtctgcatatgctcccattcaatggctagca
gacaactcacaagagcctaccgctcgcattgccagcgctgaagcggatgccttgcagggc
cctaaattagatcaagcattgatggctttagatgagcgtagtcgcaatattgtgcaatct
cgttggttagcgatggatgctgaaggcaatggcaccaagacattgcatgatcttgctgat
gagtacggcatctctgctgaacgcgtgcgccaaatcgaaactgctgcactcaaaaagatg
cgtggattactccaggcagcctaa
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