Polynucleobacter yangtzensis: PKF023_18770
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Entry
PKF023_18770 CDS
T08788
Symbol
mrdA
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00550
Peptidoglycan biosynthesis
pyt01100
Metabolic pathways
pyt01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PKF023_18770 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PKF023_18770 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pyt01011
]
PKF023_18770 (mrdA)
Enzymes [BR:
pyt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PKF023_18770 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pyt01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PKF023_18770 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDT78074
UniProt:
A0A9C7CKJ3
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Position
1934562..1936469
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AA seq
635 aa
AA seq
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MVSFKKPDLDSFQERIHIATLFVTVCFLLLVTRLVWLQLVSHGKYALLAESNRIALVPAP
ANRGLLIDRNGIVIGRNYSALTLDVNAEEVKGNVDQLISDLSEIIDISPRDRRNFKRSLE
DSRNMGTFPLRSMLNETETARFMANRYRFPGVEIRARSFREYPYNELASHLIGYIGRVSQ
KDKERMQAEIEGAKADDPDALQASFLPGIQYVGKIGLEQSYETVLRGVPGYDQVEITAGG
KPVRTLSSSPSVPGKNVVLSVDIKLQYLVEQLYGNFRGAFVAIEPETGDVLAFVSKPNFN
PNDFVEGIDSVTWKELNDSPQKPLYNRPLKGIYPPGSTYKPFMALAALEYKKRTPSQSIS
DPGYFEFGNHTFRDDKKGGHGIVDMQKSIVESCDTYYYLLARDMGVNMMHDFMKPLGFGQ
ITGIDLQGEARGVLPSTEWKKNTFKKPEQQKWYEGETISLGIGQGYNAFTILQLAHAMAN
VANNGIVMKPHLVKAIEDPFTRNRVLTTPKESYRIDLNAENIEVIKKAMLEVNISGTSAA
AFKGTGYQVGGKTGTAQVFSLNSKEYKHSATAEFLRDHALYIAFAPVDKPTIVIAMVVEN
AGFGAQYAAPIARKALDYYIEGKWPKEIPEWKRAP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttttaaaaagcctgacctagactcatttcaagagcgcattcacattgcgacc
ttgttcgtcaccgtttgttttttattgcttgttactcgccttgtatggctgcaactagtc
agtcacggaaaatatgcgctactagcggagagtaatcgcattgctcttgttcctgctcct
gcaaaccgaggtcttttaattgatcgcaatggcattgtgatcggcaggaattattccgcc
ctcactctggatgtgaatgctgaagaggtaaaaggcaacgtagaccaactgattagtgat
ctttccgaaattattgatatttcacccagagataggcgtaatttcaagcgatccctcgaa
gattcacggaatatgggcacttttcccctgcgttctatgctcaacgagaccgaaactgcc
cgttttatggcaaatcgctaccgttttcctggagtagaaatccgggccaggagcttccgg
gagtacccatacaacgaattggcctcccatttgattggctatattggccgcgtctctcaa
aaagacaaggagcgcatgcaggccgaaatcgagggcgccaaggctgacgatccagatgct
ttacaggcatctttcttgccaggcattcagtacgttggaaagattggtttagagcaaagc
tacgaaactgttttgcgtggagtgcctggatacgaccaagtagaaattactgccggcgga
aaacccgtacgcacactttctagttcgccctcagttcccggaaagaatgtggttctctca
gttgatatcaagctgcaatatttggttgagcagctttacggaaatttccgtggcgcgttt
gtcgcgattgaacctgagactggagatgtcttagcatttgtttctaagcccaacttcaat
ccaaatgattttgttgagggcattgattcggtcacctggaaagagttgaacgactcacca
cagaagcccctctataaccgtccgctaaaaggcatctatccaccaggatcaacttataag
cctttcatggcgctagccgccttggaatataaaaagcgtacgccatcgcaatccatctcc
gatcctggatactttgagtttggcaatcacactttccgcgacgacaaaaaaggtggtcat
ggcattgtggatatgcaaaagtcaattgttgaatcttgcgatacctattactacttactt
gcacgtgatatgggcgtcaacatgatgcatgactttatgaagccgcttggctttggtcaa
attactggcattgatttacaaggtgaagcaagaggcgttctaccatctaccgagtggaag
aaaaatactttcaaaaaaccagaacagcaaaaatggtacgaaggtgagaccatttctctt
ggcattggtcagggctataacgcttttactattttgcaattggctcatgccatggcgaac
gtggctaataacggcattgtgatgaaaccgcacttagtgaaagcaattgaagatccattc
acacgaaacagagtgctcacaacacccaaagaaagttatcgcatcgatctcaatgcagaa
aatattgaagtcatcaagaaagcgatgcttgaggtaaacatttcaggcacgtctgctgct
gcgtttaaaggcaccggctatcaagttggcggcaaaacaggaactgcacaagtctttagc
ttgaattccaaggaatataaacatagtgctactgcagaattcttacgcgaccatgctcta
tatattgcatttgctccggtagataaaccaaccattgtgattgccatggttgtagagaac
gctggcttcggcgcacagtatgcagcgccaattgcacgtaaagcattggactactacatt
gagggcaagtggcctaaggagattcctgaatggaaaagagccccttaa
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