Puma yagouaroundi (jaguarundi): 121011462
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Entry
121011462 CDS
T07555
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121011462 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyu03021
]
121011462 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121011462 (SUPT5H)
Transcription machinery [BR:
pyu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121011462 (SUPT5H)
RNA polymerase I system
121011462 (SUPT5H)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
121011462 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
121011462
NCBI-ProteinID:
XP_040301814
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgaggacagcaacttctccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaagaagagcggcggagtgtagcaggcagcgagaaggaggaa
gagcccgaggaagaagaggaggaggaagaggaggaagaatatgatgaggaagaggaagag
gaagatgatgacaggcctcccaagaaaccccgccatggcggcttcattctggacgaggct
gatgtggacgatgagtatgaggatgaggaccagtgggaggacggagcagaggacatttta
gagaaagaagagattgaagcctccaacatcgataatgtcgtcctggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggaccagcgagaggaagaactgggcgagtac
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtatggaggatctgatgag
ctctctgatgacatcactcagcagcagctgcttccgggagtcaaggatccaaatctgtgg
actgtcaaatgtaagattggggaggaacgggccacggccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcagtggtggcaccagagcac
gtgaagggctacatctacgtggaggcctataagcagacgcacgtgaagcaggccatcgag
ggcgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggaaatg
acagatgtgctcaaagtcgtaaaggaggtggccaacctgaagccgaagtcctgggtccgc
ctcaagaggggcatctataaggacgacatcgcccaggtggattatgtggagcccagccaa
aacaccatctccttgaagatgatcccacgcatcgactatgaccgcatcaaggcccgtatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcgacctccacagaggctgttt
gatgctgagaagatcaggtccctgggcggcgatgttgcctctgatggtgacttcctcatc
ttcgaagggaaccgttacagccggaagggctttctgttcaagagctttgccatgtctgct
gtgatcacggagggtgtgaagcccacactctctgagctggagaagtttgaggaccagccg
gagggcattgaccttgaggtggtgactgagagcacagggaaggagcgggaacacaacttc
cagcctggggacaatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ttggagttcccggcccaggaacttcggaagtactttaagatgggggaccacgtgaaggtg
attgctggccgatttgagggtgacacaggcctcattgtgcgagtggaggagaactttgtt
attctgttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcatcgggtgtggatgtggggggccagcatgaatggggggagctggtg
cagctagacccccagaccgtgggtgtcattgtgcggctggagcgggagaccttccaggta
ctgaacatgtatgggaaggtggtgactgtcaggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcagaacagaataacatccacgtgaaagacatcgtg
aaggtcattgacggcccccactcaggccgggagggcgaaattcgccatctcttccgcagc
ttcgccttcctgcattgcaagaaactggtggagaatgggggcatgtttgtctgcaagacc
cgccacctcgtcctggcagggggctcgaagccccgagatgtgaccaacttcacagtgggt
ggctttgcccctatgagtccccggatcagcagccccatgcaccccagcgctggaggtcag
cgtggtggctttggcagccctggtggtggcagtggcggcatgagcaggggccgagggcgg
agagacaacgaactcataggccagactgtgcgcatctcccaagggccctacaaaggctac
atcggtgtggtgaaggatgccacggagtccacggcccgcgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcggctcactacggtgggctcacggcgcccaggtggc
atgacctcaacctatgggcggacacccatgtatggctctcagacgcccatgtatggctct
ggctcccgcacacccatgtatggctctcagacacctctccaggatggcagccgtaccccg
cattacggttcccagacacccttgcatgacggcagccgcactcctgctcagagtggtgct
tgggaccccaacaaccctaacacgccatcacgggctgaggaagaatacgagtatgctttc
gacgacgagcccaccccgtccccacaggcctatgggggcacccccaacccccagacgcct
ggctatcccgatccctcatccccacaggtcaacccacagtacaacccacagacgccaggg
acgccagccatgtacaacacagaccagttctccccctatgccgccccctccccgcaaggc
tcctaccagcccagccccagcccccaaagctaccaccaggtggcgccaagcccagcgggc
taccagaacacccactctccagccagctaccaccccacaccctcccccatggcctatcag
gccagccccagcccgagtcctgttggctacagtccgatgacacctggagccccctcccct
ggtggctataacccgcacacaccaggctcaggaattgagcagaactctagcgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtggggcag
acaggagtcatccgcagcgtcacgggcggcatgtgctctgtgtacctgaaggacagtgag
aaggttgtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtgatcctgggtgaggatcgggaagccacaggcgtcctgttgagtatcgatggt
gaggatggcatcgtccgcatggatcttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctaa
DBGET
integrated database retrieval system
