Entry |
|
Symbol |
SMG7
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Name |
(RefSeq) protein SMG7 isoform X1
|
KO |
|
Organism |
pyu Puma yagouaroundi (jaguarundi)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pyu00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121011828 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pyu03019]
121011828 (SMG7)
Messenger RNA biogenesis [BR:pyu03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121011828 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
121011828 (SMG7)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1186 aa
MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTKWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNKSQEESYNAYP
LPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSTNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLISIGKWIADNQPRLIQCENEV
GKLLFITEIPELILEDPSEAKENLILQETSMIESLAADGNPGLKSVLSTGRNLSNNCDTG
EKPMVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTL
EKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPS
RPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQ
QRPSGPGPMNQGPQQPQPPSQQPLTSLPAQPTAQSTSQLQVQALAQQQSPTKAVPALGKS
PPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQSYYLQPQDPIKLFEPSLQPPVMQ
QQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQASVDRRGKRSPGVF
RPEQDPVPRMPFEDPKGSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGR
SLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTTSSKTELNPSLA
PQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGP
IGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSASESSWHQASTPSGTWTGHGPSMEDS
SAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH |
NT seq |
3561 nt +upstreamnt +downstreamnt
atgagcctgcagagcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattctaagctgggtccagctgaggtctggacatccaggcaggctctgcaggacctgtac
cagaaaatgctagttactgatttggaatacgctttagacaagaaagtagaacaggatctc
tggaatcatgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagca
aacccgaatcggagtgaagttcaggcaaacctatctctgttcctagaggcagctagtggc
ttctatactcagttattacaagaactgtgtacggtgtttaatgtagatttaccatgccgt
gtgaagtcttcccaattgggaattatcagcaataaacagacgcataccagcgccatagtg
aagccacagtctagctcctgttcctatatctgccagcactgcctcgtccaccttggagac
attgctcgatacagaaaccagaccagccaggcagagtcctactataggcatgcagctcag
cttgtcccctctaatggtcagccttacaatcagttggctatcttagcttcttccaaagga
gaccatctgaccacaattttctactactgcagaagcatcgctgtgaagttcccgttccca
gctgcctccactaatctacaaaaagcactttctaaagcactggaaagccgggatgaggtg
aaaaccaaatggagtgtttctgacttcatcaaggcctttattaaattccacggtcatgtg
tacctgagtaagagcttggaaaagttgagcccacttcgagagaaattggaagaacagttt
aagaggctgctgttccaaaaagctttcaactctcagcagttagttcacgtcactgtcatc
aacctgtttcaacttcatcaccttcgtgactttagcaatgaaacagagcagcatagttat
agccaagatgagcagctgtgttggacacagttgctggccctctttatgtcttttcttggc
atcctgtgcaagtgtcctctccagaacaagtctcaggaggagtcctacaatgcctatccc
cttcctgcagtcaaggtctccatggactggctgagactcagacccagggtctttcaggag
gcagtggtggatgaaagacagtacatttggccctggctaatttctcttctaaatagtttc
catccccatgaagaggatctttcaagtactaatgctacaccacttccagaggagtttgag
ttacaaggattcttggctttgagaccttctttcaggaacttggatttctccaaaggccac
cagggtattacaggagacaaagaaggtcagcaacgacaaatacgacagcagcgcttgatc
tctataggcaaatggattgctgataatcagccaaggctgattcagtgtgaaaatgaggta
gggaaattgttgtttatcacagaaattcctgagttaatactggaagaccccagtgaagcc
aaagagaacctcattctgcaagaaacatccatgatagagtcactggctgcggacgggaac
ccaggactgaaatcagtgctgtccacgggccgtaatctaagcaacaactgtgacacagga
gagaaaccaatggtcaccttcaaagagaacattaagccgcgcgaagtgaacagagaccaa
ggaagaagttttcctcccaaagaggtgagaagggactatagcaaaggaataactgtaact
aagaatgatggaaagaaggacaacaacaagaggaaaacagaaaccaagaaatgcacctta
gaaaagttacaggaaacaggaaagcagaatgtggcagtgcaggtgaaatcccagacagaa
ctaagaaagactccagtgtctgaagccaggaaaacacctgtaactcaaaccccaagtcaa
gcaagtaactcccagttcatccccattcatcaccctggagccttccctcctcttcctagc
cggccagggttcccgcccccaacatatgttattccccctcctgtggcattttctatgggc
tcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagct
cactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctctggaccagggccaatgaaccagggacctcaacagccacagccaccttcc
cagcaaccccttacatctttaccagctcagccgacagcacagtccacaagccagttgcag
gttcaagctctagctcagcagcaatcccccacaaaagccgtgccggctttggggaaaagc
cctcctcaccactctgggttccagcagtatcaacaggcagatgcctccaaacagctgtgg
aatccccctcaggttcaaggcccattagggaaaatcatgcctgtgaaacagtcctactac
cttcagccccaagaccccataaaactgtttgagccgtcattgcaacctcctgtaatgcag
cagcagcctctagagaaaaaaatgaagccttttcccatggagccatataaccataatccc
tcagaagtcaaggtcccagagttctactgggattcttcctacagcatggctgataacaga
gctgtcatggcccagcaagcaagtgtggaccgcagaggcaaacggtcaccaggagtcttc
cgtccagagcaggatcctgtgcccaggatgccatttgaggaccccaagggctcccctctg
cttcctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgattttt
tctaaccctcctgatctttacccagctctgctgggccctctcgcctctcttcctggacgg
agcctctttaaatccttgttggagaagccctcggagctcatgtcacactcatcctctttc
ttgtccctcaccggattctctctcaatcaggaaagatacccaaataacagtatgttcaat
gaggtatatgggaaaaacctgacaaccagctccaaaacagaacttaatccttcgctggcc
ccccaggagacatcactgtactccctctttgaagggaccccgtggtctccatcacttcct
gccagttcagatcattcaacaccagccagccagtctccccattcctctaacccaagcagc
ctgccgagctcccctccaacacataaccataattctgttccattctccaactttggacct
attgggactccagataacagggataggagaactgcagatcggtggaaaactgataagcca
gccatgggtgggttcggcattgattatctctcggcaacatcagcctctgagagcagttgg
catcaggccagcactccaagtggcacctggacaggccacggcccctccatggaggattcc
tctgctgtcctcatggaaagcctaaagtctatctggtccagttccatgatgcatcctgga
ccttccgctctggagcagctgttaatgcagcagaaacagaaacagcagcggggacaaggc
gccatgaaccctccacactga |