Herpailurus yagouaroundi (jaguarundi): 121012184
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Entry
121012184 CDS
T07555
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pyu03036
]
121012184 (CHD6)
Chromosome and associated proteins [BR:
pyu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121012184 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
121012184
NCBI-ProteinID:
XP_040302974
LinkDB
All DBs
Position
Unknown
AA seq
2717 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVLNHSPMSDASVNFDYKSPSPFDHGTDQEEKIEDVASHCLPQKD
LYAAEEEAETLFPRKMTSHNGMEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEARKAKEPKRAKEPKEPKQKDGVKKARKPREASGTKEAKEKRSGVDSTARTK
SKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTEGTSDIPERGNTDKEDNTEDKLDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVPSALTARLRRLVTVYQRCNRKELCRPEVLGPGNQGYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFY
SFVAMCRNVCRLPTWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLVGTAKHGLNRTNYYIMTDPQLSFLDAYRNYAQHKR
TDAQAPESLCCLYQTNSRLYESLTYTQMSRTSEPLENEPENLVKIESRDDHLAPPGGSLS
DMTCDNFISKVQDVISITHDESLLPESLESMMYGKKALIREPGSLQESPSTNTEPRKDAL
ALSASKDGNCLPAGHEAEIPSGPSFMSSLEAGVAQMNIKNGKHLLLSLSREGDVCSEAGQ
RPESIGQLEAKHLASPSLDQGNESGFVDMCHLSVCDSRRSLSSDQQLIDLLENKSLESKL
VLSQNHSEEEEEEEENEEENVGVTIGLRERPKVLHLAEPTANILREKSRGLPVDEVKRGS
LEAMSQHPRPQGAFPPAACQCHCKHTERWARGLENEEFEVDKSKGYTPDLYRSKTNSITV
EGEPTAPPSEPFQGKHELSKEPWKENAEGKKGFPAYPEASELKSEDMDFESKDDYDRDGN
SHAQDYPGKYSEEESKSSASGIAGDLGDDLQEARAPTIAQLLQEKTLFSFSEWPKDRVII
NRLDNICHVVLKGKWPSSQQYEPPGTLPTPVLTSSAGSRSSISEPETSEHSFSSGAALVA
QIQKESFLAPVFTKDDQKHRRPYEFEVERDAKARGLDQFSATHGHPPIVLNGWHGESAID
LSCTSEGSPGATSPFPLSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLR
RDDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAPSSASHPEGPVSAASA
PEPAPAAGSQAEKAIPSKSLLDWLRQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDV
NSLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGPRRRGRRPRSELLKTPAIVA
DSPSGMGPLFMNGLIAGMDLVGLQNMRNLPGIPLTGLVGFPAGFATMPTGEEVKSTLSML
PMMLPGMAAVPQMFGVGGLLNAPMATACTNTAPAPLSSTTKSGTAATEKTVEDKPSSHDV
KTDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPA
MQQARHSEAVGLESQKRKKKKIKGDSLNPNPEPAPGSEKEPGGDQNCPEPRAPVPPERGH
VAQAREGGLKDSNSDTN
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacaaaagaaagagaagcagttgtcaagtttaaaagttctgaatcac
tctccaatgtctgatgcctctgtcaattttgactacaaatccccctccccgtttgaccat
ggcactgatcaggaagagaagatcgaagatgttgccagtcactgtctgcctcagaaggac
ctgtatgctgctgaagaggaagctgagaccctttttcctaggaaaatgacgtcccataat
gggatggaggacagtggaggaggaggcaccggagtaaagaagaaaaggaagaaaaaggac
ccgggagagcaagagggggcagcgaagggaagcaaggacagggagcccaagccaaagagg
aagcgagagcctagagagccaaaggaagcccggaaggccaaggagcccaagagggccaag
gagcccaaggagcccaagcagaaggatggagtcaagaaagcacggaagccccgggaggcc
tcgggtaccaaggaggccaaagagaagaggagtggcgtggactctacagccaggacgaag
tccaagaaagccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaag
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcctgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caggtgaagcgcagaaaatataacgaggacctggatttcaaggtggtggacgatgacggg
gagacaatcgctgttcttggagccggccggacgtccgccctctcggcttctacactggca
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctagcatct
aagaccgtccaggaggttcaccctggagagcccccattcgacttggagctattctacgtt
aagtatagaaatttttcctacttgcattgtaaatgggccacaatggaagagctggaaaag
gatcctcgcattgcacagaagatcaagcgattcaggaataaacaagcccagatgaagcac
atttttactgagcctgatgaagacttgttcaacccagactatgtagaagttgatcgtgtc
ctggaggtagcccacaccaaagatgcagaaacaggagaggaggtgacgcattacctggtg
aagtggtgctcactgccttatgaagaaagtacgtgggaactagaggaagatgtggatcct
gcaaaagttaaagaatttgagtctcttcaagttctccctgaaattaagcatgtggagcgg
cctgcttcggactcctggcagaaactggagaagtctcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aattgtattttggctgatgagatggggctggggaaaaccatccagtccatcacattcctc
tcagagatattcctccgaggaatccacggcccttttctcatcatcgccccactctccacc
atcacgaactgggagcgagagttccggacatggacagagatgaatgccattgtgtaccat
ggcagccagatcagcagacagatgatccagcagtatgagatggtgtacagagatgcacag
ggaaaccccctttcaggagtcttcaagttccacgttgtcatcacaacgtttgagatgatc
ctggcagactgcccagagctgaaaaagattcactggagctgtgtgataattgacgaagcc
cacagactgaagaacaggaactgcaaacttctggagggtctaaagctcatggccctggaa
cacaaagtactgctcactgggacaccgttacagaactctgtggaggagctcttcagtttg
ctgaattttctggagccatcacagtttccttcagagactgctttcttggaggaatttgga
gatctgaaaactgaggaacaggtgaagaaactgcagtctatcctaaaaccaatgatgctt
cggcggctgaaagatgatgtggaaaagaaccttgctcctaaacaggagacgatcattgaa
gtagagctcaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggggcaaatcaacacaatatgcccaatctcatcaacaccatgatggag
ctgagaaagtgctgtaaccatccgtacctgatcaatggggcagaggagaaaattctggaa
gatttccgaaaaacccacagccccgatgcccctgactttcagctgcaggccatgattcaa
gcagcagggaagttggtgctgattgataaactgctccctaagctgattgcaggtggtcac
aaagtcctcatcttctcccagatggtgcgctgcctcgatatcctcgaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgatttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacggctgctgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagcaaa
gccgtgaaggtgtatcgtctcattactcggaactcctatgagcgtgaaatgtttgacaaa
gccagcctaaagctgggcctggacaaggctgttcttcaggacataaaccgaaagggcagc
accaatggggtacaacagctctcaaaaatggaagtagaggacttgctccggaaaggggct
tatggagccctgatggacgaggaagatgaaggctccaaattctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatctact
tttgccaaggctagctttgtggcttcaggaaacaggacagatatttccttagatgaccca
aacttttggcagaaatgggctaaaatagctgaattggacaccgaagcaaagaatgaaaag
gagagcttagtgatcgaccggcctcgagtgagaaagcagaccaaacactacaactccttt
gaggaggatgagctcatggagttctcggagctagacagcgactcagacgaaaggcccacg
aggtccagacgcctcaatgacaaaaccaggcgctacctccgagccgagtgtttccgggta
gagaagaacctgctcatctttggctggggccggtggaaggacatcctgacccacgggcgg
ttcaagtggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtctac
tgtgtcaagcattacaagggggacgagaagatcaagagcttcatttgggaactgatcaca
cctaccaaagacgggcaggcccagaccctgcagaaccactcagggttgtctgctccagtc
cccagagggaggaaggggaagaagacgaagaaccagctgctgctccctgagttgaagaat
gcagactggctggccacctgcaaccccgaggtggtcttgcatgatgacggctataagaaa
cacctcaaacagcactgcaacaaggtccttttgcgagtccggatgctgtactacctgaaa
gctgaaatactgggagaggcagctgataaagcgtttgaaggcacccctgccagggagcta
gacgtacccctgcccgacatcgactacatggagatcccagtggattggtgggatgctgag
gccgataagtcccttctgataggcgtgttcaaacacgggtatgagaggtacaatgccatg
cgagcagacccagcactttgcttcctggagaaagtcgggatgccagatgagaagtctctt
tctgcagaacagggtgttacagaggggacctcagacattcccgagcgaggcaacacggat
aaagaagacaacactgaagacaagttagatggcctgcagaaacaaatggagagttccagc
gatggaggtgatggcatttttggcgaaaagaaagatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagttccgtctgctctcacggctcggctcagacgt
ctggtcaccgtgtaccagcgctgtaaccgcaaggaactctgccgaccggaagtcctggga
ccaggtaaccaaggatactgggtccaggaagagatgttcaggagaacctcagaaatggat
ctcatcaacaaggaagctcaaaagaggtggactaggagagagcaagcagacttctacaga
gcagtgtcctcctttggggttgtttatgatcaagaaaagaaaacttttgactggacgcag
ttccgcatcatttcccgtttggacaagaagtcggatgagagcctggagcactatttttat
agctttgtggccatgtgccggaacgtctgtcgtctgcccacatggaaagatggtggtccc
ccagatcccagcatctatgtggaacccatcacggaggaacgggccgcgagaaccctttac
cgcattgagctgctgcggaaggtccgagagcaagtgctgaggtgtcctcagctgcacgag
cgcctccagctctgcaggcccagcctctacctcccggtctggtgggagtgtgggaagcac
gaccgagacctgctcgtcggcaccgccaagcatgggctgaaccgcactaactattacatc
atgactgacccccagctgtccttcctggatgcctacagaaactacgcccagcataagaga
acggacgcccaggcaccagaaagtctctgttgcctttaccagaccaactccaggctgtat
gaatctcttacgtacactcagatgagcaggacttcagagccccttgaaaatgaacctgag
aatctggtgaaaatagaaagtagagatgatcatctcgctccacctgggggcagtttatct
gacatgacttgtgacaactttatttctaaagttcaggatgtcatttccatcacccacgat
gaaagtctgctgcctgagtccttggagagcatgatgtatgggaagaaggctctcattcga
gagccgggctctctccaggagagccccagtacaaacacagagcccagaaaggatgctctg
gccctctcggcaagcaaagatgggaactgcctgcctgctggccatgaggcagaaatacct
tcagggccgtcttttatgagtagcttagaagcaggggtagctcagatgaacatcaaaaat
ggaaaacatctgttgctgtctctttcaagggaaggggatgtctgcagtgaggcagggcag
aggcctgaaagcattgggcagctagaagccaaacacttagcttccccttccttggatcag
ggaaatgaaagtgggtttgtagatatgtgccatcttagtgtctgtgattccagaagaagc
ttgtcatcagaccagcagttaattgatttattagaaaacaaaagtttagaaagtaaattg
gttttgagtcagaaccacagtgaagaggaggaggaagaggaagagaatgaggaggagaac
gtaggtgtgaccataggcctgagggaaaggcccaaggttttgcatctagccgagcccact
gctaatatcctaagggaaaagagccgaggcctccctgtggatgaggtcaagagaggaagc
ctggaggccatgagccagcatcctagaccacagggggcttttcctccagcagcctgtcag
tgtcactgcaagcacacggagaggtgggcacgtggcctcgagaacgaggagtttgaagtg
gacaaatccaagggttataccccagacctgtacagaagcaaaacgaatagtatcacagtg
gagggtgagcccaccgctcctccatcagagccctttcagggaaagcacgagctgtcaaaa
gaaccttggaaggaaaatgcagaaggcaaaaaaggtttccctgcatatccagaagcaagt
gagctcaagtccgaagacatggattttgagagtaaagatgattacgacagagatgggaac
agccatgctcaagattacccagggaaatactctgaagaggagagcaagagctcagcatca
ggcattgctggagacctcggggatgacctacaggaggctcgggctcccaccattgctcaa
ctgctccaggagaagaccctcttttccttctctgagtggccaaaggatcgcgtgataatc
aaccgcctggataatatctgccacgtggtgttaaaggggaagtggccttccagccagcag
tacgagcccccgggcacactgcctacccctgtgttaaccagcagtgctggttctcgaagc
agcatctcagagccagaaacatcagaacacagcttcagcagtggtgcagcattggtggcc
cagatccagaaggagagcttcctggctccagtattcacaaaggatgaccaaaagcacaga
cggccctatgagtttgaggtggagcgggatgcaaaggcgcggggtctggaccagttctcc
gccacccacgggcacccccccatcgtcctcaatggctggcacggggagtccgcaatagac
ctctcctgcacttcagaggggtccccaggagccacgtctcctttcccactgagtgccagc
acccctaagatcggggctatcggttcacttcaaggagccctcggcatggacttgtctggg
attctgcaagctggcctgatccatccagtgacaggacagatcgtcaacggaagcctcaga
agagatgacgctgccacgaggaggaggagagggagacggaaacatgttgaaggagggatg
gacctcatctttttgaaggagcagacacttcaggcaggaatcttggaagtccatgaagac
ccagggcaggcgccctcaagcgcctcacatccggaagggccggtgtctgccgcttcagcc
cctgagccagccccagcagctggcagccaggctgagaaagccattcccagcaagagtctc
cttgactggctgaggcagcaggctgattactccttagaggttcctggctttggagcaaat
ttttcagacaaaccaaagcagaggaggccacgctgtaaggaacctggaaaattagacgtc
aactccctgagtggggaagagagggttcccgctgtccccaaggagccaggactaagggga
tttctcccagaaaacaagttcaatcacaccctggccgagcctgttcttcgagatgcgggc
ccccgcaggagggggaggcggcctcggagcgagctcctgaagacccctgccatcgtggcg
gactctccctcagggatggggccactgttcatgaacggactgatcgctgggatggacctg
gtaggactccagaacatgagaaatctgccaggcatccccctcacgggcctggtggggttc
ccggccggcttcgccacgatgcccacgggcgaagaggtcaaaagcaccttgagcatgctg
cccatgatgctgccgggaatggccgcagtgccccagatgttcggtgtcgggggactcctc
aacgcacccatggccactgcctgcaccaacaccgctccagcgcctctgtcaagcacaaca
aaaagtggcacagcagcgaccgaaaagactgtagaagacaagccgagtagccatgatgta
aaaacggacacgttagctgaagacaagcctggtcctggtccgttttctgatcagtccgaa
cctgcaataactaccagtagtcctgtggcttttaacccctttctcatcccaggagtgtct
cctggactcatttacccatccatgtttctgtccccggggatgggcatggctctgccggcg
atgcagcaggccagacactctgaagcagtaggtctggagagccagaagcggaagaagaag
aaaataaaaggggacagcctgaaccccaacccagagcctgctcccgggtccgaaaaggag
ccaggcggcgatcagaactgccccgaacccagggcccccgtccctccagagagaggacat
gtggcacaggccagggaagggggcctcaaagactccaacagtgacaccaattag
DBGET
integrated database retrieval system
